H-group (homology)
298.1 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
Ligands and drugs
5,598
Member domains
2,055
with ligand contacts (≤ 4 Å)
36.7% of members
1,808
with DrugDomain annotations
32.3% of members
1,664
with a DrugBank compound
29.7% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 298.1 belongs to X-group 298 FwdE/GAPDH domain-like, which binds 8.0 ligand superclasses per 20 proteins, broader than 56% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB14128 | NAD | Nadide | 823 |
| DB03461 | NAP | Nicotinamide adenine dinucleotide phosphate | 206 |
| DB02338 | NDP | NADPH | 200 |
| DB00157 | NAI | NADH | 82 |
| DB02263 | G3H | D-glyceraldehyde 3-phosphate | 45 |
| DB02948 | FOM | Fosmidomycin | 29 |
| DB04122 | BG6 | beta-D-glucose 6-phosphate | 24 |
| DB04267 | PDC | Dipicolinic acid | 22 |
| DB04510 | 3PG | 3-phospho-D-glyceric acid | 15 |
| DB13178 | INS | Inositol | 14 |
| DB04193 | HSE | L-Homoserine | 11 |
| DB00151 | CYS | Cysteine | 10 |
| DB02379 | BGC | Beta-D-Glucose | 10 |
| DB03345 | BME | Mercaptoethanol | 9 |
| DB04207 | SHR | L-Saccharopine | 9 |
| DB01992 | COA | Coenzyme A | 8 |
| DB03085 | GOA | Glycolic acid | 8 |
| DB02515 | G3P | sn-glycerol 3-phosphate | 7 |
| DB03331 | NMD | N-naphthalen-1-ylmethyl-2'-[3,5-dimethoxybenzamido]-2'-deoxy-adenosine | 7 |
| DB04477 | TND | 2'-Deoxy-2'-[(3,5-dimethoxybenzoyl)amino]-N-[(1R)-1,2,3,4-tetrahydro-1-naphthalenyl]adenosine | 7 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| NAD | NICOTINAMIDE-ADENINE-DINUCLEOTIDE | 978 |
| NAP | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 228 |
| NDP | NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | 216 |
| CL | CHLORIDE ION | 119 |
| MNmetal | MANGANESE (II) ION | 93 |
| NAmetal | SODIUM ION | 63 |
| G3H | GLYCERALDEHYDE-3-PHOSPHATE | 59 |
| MGmetal | MAGNESIUM ION | 54 |
| NAI | 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | 50 |
| CAmetal | CALCIUM ION | 34 |
| FOM | 3-[FORMYL(HYDROXY)AMINO]PROPYLPHOSPHONIC ACID | 30 |
| XPE | 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL | 26 |
| BG6 | 6-O-phosphono-beta-D-glucopyranose | 25 |
| HP7 | (2S,3S,4R,5R,6R)-5-acetamido-6-[[[(2R,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxy-3,4-dihydroxy-oxane-2-carboxylic acid | 21 |
| PDC | PYRIDINE-2,6-DICARBOXYLIC ACID | 19 |
| AGmetal | SILVER ION | 17 |
| 3PG | 3-PHOSPHOGLYCERIC ACID | 15 |
| INS | 1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE | 14 |
| Kmetal | POTASSIUM ION | 14 |
| CYS | CYSTEINE | 12 |