T-group (topology)

300.1.1 Phospholipase D/nuclease

Open in classification tree →

Ligands and drugs

1,899

Member domains

338

with ligand contacts (≤ 4 Å)

17.8% of members

264

with DrugDomain annotations

13.9% of members

with a DrugBank compound

4.8% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 300.1.1 belongs to X-group 300 Phospholipase D/nuclease, which has 13 proteins with classified ligands. View its chemical profile →

DrugBank compounds

DrugBank	PDB ligand	Name	Domains
DB00127	SPM	Spermine	8
DB03434	MPO	3-(N-morpholino)propanesulfonic acid	8
DB00122	—	Choline	4
DB00171	ATP	ATP	4
DB14006	—	—	4
DB07898	HI5	(2R)-3-[(tetrahydroxyphosphoranyl)oxy]-1,2-propanediyl dibutanoate	2
DB08376	PD7	(2R)-3-(phosphonooxy)propane-1,2-diyl diheptanoate	2
DB09459	TLA	L-tartaric acid	2
DB14756	SRT	meso-Tartaric acid	2

Most frequently bound compounds

PDB ligand	Name	Domains in contact
VO4	VANADATE ION	36
OTS	4-(2S-AMINO-1-HYDROXYETHYL)PHENOL	20
CL	CHLORIDE ION	17
NAmetal	SODIUM ION	12
GHM	benzene-1,2,4-tricarboxylic acid	8
GJP	4-hydroxyquinoline-3-carboxylic acid	8
MPO	3[N-MORPHOLINO]PROPANE SULFONIC ACID	8
NAG	2-acetamido-2-deoxy-beta-D-glucopyranose	8
OTR	4-(2R-AMINO-1-HYDROXYETHYL)PHENOL	8
PO3	PHOSPHITE ION	8
SPM	SPERMINE	8
ATP	ADENOSINE-5'-TRIPHOSPHATE	6
IPD	D-MYO-INOSITOL-1-PHOSPHATE	6
VHY	(2R)-3-(phosphonooxy)propane-1,2-diyl dibutanoate	6
WO4	TUNGSTATE(VI)ION	6
ZNmetal	ZINC ION	6
IOD	IODIDE ION	5
A1AIM	(8M)-8-{4-(benzylcarbamoyl)-2-[(fluorosulfonyl)oxy]phenyl}-4-oxo-1,4-dihydroquinoline-3-carboxylic acid	4
GJS	4-hydroxybenzene-1,2-dicarboxylic acid	4
GM7	4-aminobenzene-1,2-dicarboxylic acid	4