ECOD
F-group (family)

301.3.1.1 OmpA

Open in classification tree →Pfam PF00691 →

Ligands and drugs

689
Member domains
134
with ligand contacts (≤ 4 Å)
19.4% of members
135
with DrugDomain annotations
19.6% of members
120
with a DrugBank compound
17.4% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 301.3.1.1 belongs to X-group 301 Bacillus chorismate mutase-like, which binds 10.5 ligand superclasses per 20 proteins, broader than 97% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB03590API2,6-Diaminopimelic Acid19
DB01786DALD-Alanine11
DB00160ALAAlanine9
DB00145GLYGlycine7
DB04736MLD2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE(BETA1-4)-2-ACETAMIDO-1,6-ANHYDRO-3-O-[(R)-1-CARBOXYETHYL]-2-DEOXY-BETA-D-GLUCOPYRANOSE-L-ALANYL-GAMMA-D-GLUTAMYL-MESO-DIAMINOPIMELYL-D-ALANINE4
DB00125ARGArginine2
DB02219CXS3-(cyclohexylamino)propanesulfonic acid2
DB14756SRTmeso-Tartaric acid2
DB019725GPGuanosine-5'-Monophosphate1

Most frequently bound compounds

PDB ligandNameDomains in contact
API2,6-DIAMINOPIMELIC ACID19
DALD-ALANINE11
ALAALANINE9
CLCHLORIDE ION9
GLYGLYCINE9
7QA(2R,6S)-2-amino-6-(carboxyamino)-7-{[(1R)-1-carboxyethyl]amino}-7-oxoheptanoic acid4
CAmetalCALCIUM ION4
MLDGLCNAC(BETA1-4)-MURNAC(1,6-ANHYDRO)-L-ALA-GAMMA-D-GLU-MESO-A2PM-D-ALA4
NAmetalSODIUM ION4
AMUN-acetyl-beta-muramic acid2
ARGARGININE2
CXS3-CYCLOHEXYL-1-PROPYLSULFONIC ACID2
NImetalNICKEL (II) ION2
SRTS,R MESO-TARTARIC ACID2
5GPGUANOSINE-5'-MONOPHOSPHATE1
PLMPALMITIC ACID1
POPPYROPHOSPHATE 2-1
Z41(2S)-3-hydroxypropane-1,2-diyl dihexadecanoate1