T-group (topology)
304.1.1 GHMP Kinase, C-terminal domain
Ligands and drugs
1,770
Member domains
266
with ligand contacts (≤ 4 Å)
15.0% of members
242
with DrugDomain annotations
13.7% of members
122
with a DrugBank compound
6.9% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 304.1.1 belongs to X-group 304 Alpha-beta plaits, which binds 8.8 ligand superclasses per 20 proteins, broader than 75% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB16833 | ADP | Adenosine disphosphate | 21 |
| DB02930 | AGS | Adenosine 5'-[gamma-thio]triphosphate | 14 |
| DB00171 | ATP | ATP | 6 |
| DB03518 | MEV | Mevalonic acid | 5 |
| DB03687 | CDM | 4-(Cytidine 5'-diphospho)-2-C-methyl-D-erythritol | 5 |
| DB00167 | ILE | Isoleucine | 4 |
| DB02228 | 2FG | 2-deoxy-2-fluoro-β-D-galactose | 4 |
| DB00131 | AMP | Adenosine phosphate | 2 |
| DB01632 | PRP | 5-O-phosphono-alpha-D-ribofuranosyl diphosphate | 2 |
| DB02097 | CTN | Cytidine | 2 |
| DB03403 | C5P | Cytidine-5'-Monophosphate | 2 |
| DB04555 | CDP | Cytidine-5'-Diphosphate | 2 |
| DB00156 | THR | Threonine | 1 |
| DB03567 | A2G | alpha-N-Acetyl-D-galactosamine | 1 |
| DB03909 | ACP | Adenosine-5'-[Beta, Gamma-Methylene]Triphosphate | 1 |
| DB04193 | HSE | L-Homoserine | 1 |
| DB04349 | PGO | (S)-propane-1,2-diol | 1 |
| DB04395 | — | Phosphoaminophosphonic Acid-Adenylate Ester | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| GAL | beta-D-galactopyranose | 56 |
| GLA | alpha-D-galactopyranose | 34 |
| DP6 | (3R)-3-HYDROXY-5-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID | 31 |
| CL | CHLORIDE ION | 28 |
| HFK | 2-(1,3-benzoxazol-2-ylamino)spiro[1,6,7,8-tetrahydroquinazoline-4,1'-cyclohexane]-5-one | 24 |
| ADP | ADENOSINE-5'-DIPHOSPHATE | 20 |
| ANP | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | 19 |
| NAmetal | SODIUM ION | 16 |
| AGS | PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER | 13 |
| PMV | (3R)-3-HYDROXY-3-METHYL-5-(PHOSPHONOOXY)PENTANOIC ACID | 9 |
| CDM | 4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL | 7 |
| FM0 | (3R)-3-(fluoromethyl)-3-hydroxy-5-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}pentanoic acid | 7 |
| MEV | (R)-MEVALONATE | 7 |
| 2P0 | 1-({[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}acetyl)-L-proline | 6 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 6 |
| BR | BROMIDE ION | 6 |
| MGmetal | MAGNESIUM ION | 6 |
| 2FG | 2-deoxy-2-fluoro-beta-D-galactopyranose | 4 |
| GAF | 2-deoxy-2-fluoro-alpha-D-galactopyranose | 4 |
| HR8 | 5-chloranyl-2-methoxy-~{N}-(2-methylpropyl)benzamide | 4 |