T-group (topology)
304.30.1 D-ribose-5-phosphate isomerase (RpiA), lid domain
Ligands and drugs
586
Member domains
40
with ligand contacts (≤ 4 Å)
6.8% of members
41
with DrugDomain annotations
7.0% of members
13
with a DrugBank compound
2.2% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 304.30.1 belongs to X-group 304 Alpha-beta plaits, which binds 8.8 ligand superclasses per 20 proteins, broader than 75% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB01756 | DER | 4-phospho-L-threonic acid | 5 |
| DB04349 | PGO | (S)-propane-1,2-diol | 2 |
| DB02053 | R5P | Ribose-5-phosphate | 1 |
| DB04127 | ABF | beta-D-arabinofuranose 5-phosphate | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CL | CHLORIDE ION | 17 |
| NAmetal | SODIUM ION | 16 |
| ARF | FORMAMIDE | 4 |
| Kmetal | POTASSIUM ION | 4 |
| PGO | S-1,2-PROPANEDIOL | 3 |
| BR | BROMIDE ION | 2 |
| ABF | 5-O-phosphono-beta-D-arabinofuranose | 1 |