ECOD
F-group (family)

304.4.1.23 Dyp_perox_C

Open in classification tree →Pfam PF20628 →

Ligands and drugs

454
Member domains
391
with ligand contacts (≤ 4 Å)
86.1% of members
279
with DrugDomain annotations
61.5% of members
278
with a DrugBank compound
61.2% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 304.4.1.23 belongs to X-group 304 Alpha-beta plaits, which binds 8.8 ligand superclasses per 20 proteins, broader than 75% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB18267HEMFerroheme272
DB09140OXYOxygen39
DB00141NAGN-Acetylglucosamine12
DB12529NO2Nitrite4
DB02285PP9Protoporphyrin2
DB03085GOAGlycolic acid2
DB00126ASCAscorbic acid1
DB03902OXDOxalic Acid1
DB04237TAMTris(Hydroxyethyl)Aminomethane1
DB11091PEOHydrogen peroxide1

Most frequently bound compounds

PDB ligandNameDomains in contact
HEMPROTOPORPHYRIN IX CONTAINING FE383
OXYOXYGEN MOLECULE55
OOXYGEN ATOM40
MGmetalMAGNESIUM ION39
CLCHLORIDE ION20
NAG2-acetamido-2-deoxy-beta-D-glucopyranose12
NONITRIC OXIDE12
NO2NITRITE ION10
CYNCYANIDE ION8
7PE2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL4
VOHVeratryl alcohol4
NAmetalSODIUM ION3
KmetalPOTASSIUM ION2
N7HDELTA-MESO NITROHEME2
NImetalNICKEL (II) ION2
PP9PROTOPORPHYRIN IX2
3DM2,6-dimethoxyphenol1
ASCASCORBIC ACID1
GOAGLYCOLIC ACID1
MH0Mesoheme1