F-group (family)
304.48.1.6 DNA_pol_A
Ligands and drugs
479
Member domains
308
with ligand contacts (≤ 4 Å)
64.3% of members
272
with DrugDomain annotations
56.8% of members
133
with a DrugBank compound
27.8% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 304.48.1.6 belongs to X-group 304 Alpha-beta plaits, which binds 8.8 ligand superclasses per 20 proteins, broader than 75% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02181 | DGT | 2'-Deoxyguanosine-5'-Triphosphate | 33 |
| DB02452 | TTP | Thymidine 5'-triphosphate | 14 |
| DB02189 | DDS | 2',3'-Dideoxyadenosine triphosphate | 12 |
| DB02431 | CTP | Cytidine-5'-Triphosphate | 10 |
| DB03258 | DCP | 2'-Deoxycytidine 5'-triphosphate | 9 |
| DB03222 | DTP | dATP | 4 |
| DB07435 | BAP | 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 170 |
| DG3 | 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE | 42 |
| CAmetal | CALCIUM ION | 36 |
| DGT | 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | 36 |
| MNmetal | MANGANESE (II) ION | 31 |
| DPO | DIPHOSPHATE | 24 |
| DCT | 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE | 21 |
| TTP | THYMIDINE-5'-TRIPHOSPHATE | 15 |
| DCP | 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE | 12 |
| DDS | 2',3'-dideoxyadenosine triphosphate | 12 |
| CTP | CYTIDINE-5'-TRIPHOSPHATE | 10 |
| XG4 | 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine | 9 |
| ZNmetal | ZINC ION | 9 |
| D3T | 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE | 8 |
| A1LWE | [[(2~{R},3~{R},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-4-methoxy-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate | 6 |
| CL | CHLORIDE ION | 5 |
| DAD | 2',3'-DIDEOXYADENOSINE-5'-TRIPHOSPHATE | 5 |
| DTP | 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE | 4 |
| A1A2C | 2-{3-[(2R)-3-(dimethylamino)-2-hydroxypropyl]-2-oxoimidazolidin-1-yl}-4,6-bis(trifluoromethyl)phenyl (4-fluorophenyl)(methyl)carbamate | 2 |
| 0KL | 5-(5-aminopent-1-yn-1-yl)-2'-deoxyuridine 5'-(tetrahydrogen triphosphate) | 1 |