F-group (family)
304.48.1.8 RdRP_1
Ligands and drugs
328
Member domains
266
with ligand contacts (≤ 4 Å)
81.1% of members
255
with DrugDomain annotations
77.7% of members
172
with a DrugBank compound
52.4% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 304.48.1.8 belongs to X-group 304 Alpha-beta plaits, which binds 8.8 ligand superclasses per 20 proteins, broader than 75% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00171 | ATP | ATP | 22 |
| DB04137 | GTP | Guanosine-5'-Triphosphate | 22 |
| DB02431 | CTP | Cytidine-5'-Triphosphate | 6 |
| DB04160 | PPV | Pyrophosphoric acid | 5 |
| DB03896 | 3PO | Triphosphoric acid | 4 |
| DB00544 | URF | Fluorouracil | 3 |
| DB00811 | RBV | Ribavirin | 3 |
| DB01972 | G | Guanosine-5'-Monophosphate | 3 |
| DB04005 | UTP | Uridine 5'-triphosphate | 3 |
| DB03258 | DCP | 2'-Deoxycytidine 5'-triphosphate | 2 |
| DB04786 | SVR | Suramin | 2 |
| DB00130 | GLN | L-Glutamine | 1 |
| DB02338 | NDP | NADPH | 1 |
| DB03685 | U5P | Uridine monophosphate | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 89 |
| MNmetal | MANGANESE (II) ION | 58 |
| ZNmetal | ZINC ION | 45 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 22 |
| POP | PYROPHOSPHATE 2- | 21 |
| NAmetal | SODIUM ION | 20 |
| GTP | GUANOSINE-5'-TRIPHOSPHATE | 19 |
| DCT | 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE | 9 |
| 2NG | 4-({4-methyl-3-[(3-nitrobenzoyl)amino]benzoyl}amino)naphthalene-1,5-disulfonic acid | 7 |
| CTP | CYTIDINE-5'-TRIPHOSPHATE | 6 |
| MN3metal | MANGANESE (III) ION | 6 |
| PPV | PYROPHOSPHATE | 5 |
| 20V | 3-[(E)-{4-formyl-5-hydroxy-6-methyl-3-[(phosphonooxy)methyl]pyridin-2-yl}diazenyl]-7-nitronaphthalene-1,5-disulfonicacid | 4 |
| 3PO | TRIPHOSPHATE | 4 |
| CAmetal | CALCIUM ION | 4 |
| NImetal | NICKEL (II) ION | 4 |
| 0BU | 8-({3-[({3-[(4,6,8-trisulfonaphthalen-1-yl)carbamoyl]phenyl}carbamoyl)amino]benzoyl}amino)naphthalene-1,3,5-trisulfonicacid | 3 |
| 2TU | 1-(beta-D-ribofuranosyl)-2-thioxo-2,3-dihydropyrimidin-4(1H)-one | 3 |
| CL | CHLORIDE ION | 3 |
| RBV | 1-(beta-D-ribofuranosyl)-1H-1,2,4-triazole-3-carboxamide | 3 |