T-group (topology)
304.48.2 'palm' domain in birnaviruse RNA-dependent RNA polymerase
Ligands and drugs
52
Member domains
41
with ligand contacts (≤ 4 Å)
78.8% of members
41
with DrugDomain annotations
78.8% of members
12
with a DrugBank compound
23.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 304.48.2 belongs to X-group 304 Alpha-beta plaits, which binds 8.8 ligand superclasses per 20 proteins, broader than 75% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00171 | ATP | ATP | 1 |
| DB04555 | CDP | Cytidine-5'-Diphosphate | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| Kmetal | POTASSIUM ION | 21 |
| MGmetal | MAGNESIUM ION | 14 |
| CL | CHLORIDE ION | 10 |
| POP | PYROPHOSPHATE 2- | 3 |
| 2KH | 5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine | 2 |
| LUmetal | LUTETIUM (III) ION | 2 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 1 |
| MNmetal | MANGANESE (II) ION | 1 |