T-group (topology)
304.54.1 CcmK-like
Ligands and drugs
3,929
Member domains
329
with ligand contacts (≤ 4 Å)
8.4% of members
308
with DrugDomain annotations
7.8% of members
243
with a DrugBank compound
6.2% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 304.54.1 belongs to X-group 304 Alpha-beta plaits, which binds 8.8 ligand superclasses per 20 proteins, broader than 75% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB04349 | PGO | (S)-propane-1,2-diol | 8 |
| DB03994 | ETA | Ethanolamine | 6 |
| DB01694 | TAR | D-tartaric acid | 5 |
| DB03345 | BME | Mercaptoethanol | 2 |
| DB03309 | NHE | N-cyclohexyltaurine | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CL | CHLORIDE ION | 41 |
| NAmetal | SODIUM ION | 32 |
| TAR | D(-)-TARTARIC ACID | 15 |
| SF4 | IRON/SULFUR CLUSTER | 12 |
| PGO | S-1,2-PROPANEDIOL | 7 |
| CAmetal | CALCIUM ION | 6 |
| ETA | ETHANOLAMINE | 6 |
| SCN | THIOCYANATE ION | 5 |
| ZNmetal | ZINC ION | 3 |
| HGmetal | MERCURY (II) ION | 2 |
| Kmetal | POTASSIUM ION | 2 |
| B12 | COBALAMIN | 1 |
| BME | BETA-MERCAPTOETHANOL | 1 |
| MGmetal | MAGNESIUM ION | 1 |
| NHE | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID | 1 |