F-group (family)
307.1.1.3 VanY
Ligands and drugs
47
Member domains
37
with ligand contacts (≤ 4 Å)
78.7% of members
37
with DrugDomain annotations
78.7% of members
30
with a DrugBank compound
63.8% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 307.1.1.3 belongs to X-group 307 Hedgehog/DD-peptidase, which binds 5.0 ligand superclasses per 20 proteins, narrower than 82% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB01786 | DAL | D-Alanine | 9 |
| DB00123 | LYS | Lysine | 5 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ZNmetal | ZINC ION | 32 |
| CL | CHLORIDE ION | 15 |
| DAL | D-ALANINE | 9 |
| CUmetal | COPPER (II) ION | 4 |
| MGmetal | MAGNESIUM ION | 4 |
| 2D8 | (2R)-3-[(R)-[(1S)-1-aminoethyl](hydroxy)phosphoryl]-2-methylpropanoic acid | 3 |
| LY0 | (2R)-3-[(R)-[(1R)-1-aminoethyl](hydroxy)phosphoryl]-2-methylpropanoic acid | 3 |
| LYS | LYSINE | 1 |