X-group (possible homology)

3087 CDGSH iron-sulfur domains

Ligands and drugs

150
Member domains
76
with ligand contacts (≤ 4 Å)
50.7% of members
63
with DrugDomain annotations
42.0% of members
3
with a DrugBank compound
2.0% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

ClassyFire chemical superclasses of the ligands bound by this X-group's proteins, from DrugDomain annotations.

3
Proteins with classified ligands
4
Superclasses bound (of 23)
—
Superclasses per 20 proteins
fewer than 20 proteins: too few to compare at equal depth

The raw number of superclasses rises with the number of proteins sampled; the per-20 value compares X-groups at equal depth.

SuperclassProteinsExpected
0.25×observed / expected4×
RatioSignificance
Benzenoids10.24.62×not tested
Organic oxygen compounds10.61.70×not tested
Homogeneous non-metal compounds10.61.57×not tested
Homogeneous metal compounds11.50.69×not tested
enriched (q < 0.05)depleted (q < 0.05)not significantnot tested (expected < 5)

Unit: a protein (UniProt accession) with a ligand-binding domain in this X-group, counted once per superclass. Expected counts use each superclass's frequency across all ligand-binding X-groups; significance is Fisher's exact test with Benjamini–Hochberg correction. Buffers and crystallization additives are excluded. ECOD v295.2; the method follows the ECOD 2027 update, whose published figures used a slightly different artifact filter.

DrugBank compounds

DrugBankPDB ligandNameDomains
DB09459TLAL-tartaric acid2
DB00695FUNFurosemide1

Most frequently bound compounds

PDB ligandNameDomains in contact
FESFE2/S2 (INORGANIC) CLUSTER76
CDLCARDIOLIPIN8
PC11,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE6
49I2-benzamido-4-[(2~{R})-1,2,3,4-tetrahydronaphthalen-2-yl]thiophene-3-carboxylic acid5
3PE1,2-Distearoyl-sn-glycerophosphoethanolamine4
4OY2-benzamido-4-[(2~{S})-1,2,3,4-tetrahydronaphthalen-2-yl]thiophene-3-carboxylic acid2
TLAL(+)-TARTARIC ACID2
ZNmetalZINC ION2
CLCHLORIDE ION1
FUN5-(AMINOSULFONYL)-4-CHLORO-2-[(2-FURYLMETHYL)AMINO]BENZOIC ACID1