F-group (family)
309.1.1.3 LuxS
Ligands and drugs
292
Member domains
31
with ligand contacts (≤ 4 Å)
10.6% of members
31
with DrugDomain annotations
10.6% of members
16
with a DrugBank compound
5.5% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 309.1.1.3 belongs to X-group 309 LuxS, MPP, ThrRS/AlaRS common domain, which binds 6.7 ligand superclasses per 20 proteins, narrower than 64% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00134 | MET | Methionine | 8 |
| DB04346 | PAV | (2r,4s)-2-Methyl-2,3,3,4-Tetrahydroxytetrahydrofuran | 2 |
| DB04422 | HCS | Homocysteine | 2 |
| DB11142 | MSE | Selenomethionine | 2 |
| DB02321 | RHC | 5-(3-Amino-4,4-Dihyroxy-Butylsulfanylmethyl)-Tetrahydro-Furan-2,3,4-Triol | 1 |
| DB04182 | KRI | (S)-2-Amino-4-[(2s,3r)-2,3,5-Trihydroxy-4-Oxo-Pentyl]Mercapto-Butyric Acid | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ZNmetal | ZINC ION | 28 |
| MET | METHIONINE | 8 |
| HGmetal | MERCURY (II) ION | 4 |
| COmetal | COBALT (II) ION | 3 |
| HCS | 2-AMINO-4-MERCAPTO-BUTYRIC ACID | 2 |
| MSE | SELENOMETHIONINE | 2 |
| PAV | (2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran | 2 |
| H1D | (2S)-2-AMINO-4-[(2R,3S)-2,3-DIHYDROXY-3-N-HYDROXYCARBAMOYL-PROPYLMERCAPTO]BUTYRIC ACID | 1 |
| HYI | (2S)-2-AMINO-4-[(2R,3R)-2,3-DIHYDROXY-3-N-HYDROXYCARBAMOYL-PROPYLMERCAPTO]BUTYRIC ACID | 1 |
| KRI | (S)-2-AMINO-4-[(2S,3R)-2,3,5-TRIHYDROXY-4-OXO-PENTYL]MERCAPTO-BUTYRIC ACID | 1 |
| RHC | (2S)-2-amino-4-[[(2S,3S,4R,5R)-3,4,5-trihydroxyoxolan-2-yl]methylsulfanyl]butanoic acid | 1 |