F-group (family)
314.1.1.4 tRNA-synt_2c
Ligands and drugs
796
Member domains
42
with ligand contacts (≤ 4 Å)
5.3% of members
43
with DrugDomain annotations
5.4% of members
39
with a DrugBank compound
4.9% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 314.1.1.4 belongs to X-group 314 Class II aaRS and biotin synthetases, which binds 8.7 ligand superclasses per 20 proteins, broader than 73% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB03376 | A5A | 5'-O-(N-(Alanyl)sulfamoyl)adenosine | 23 |
| DB02486 | HED | 2-Hydroxyethyl Disulfide | 9 |
| DB00160 | ALA | Alanine | 4 |
| DB03345 | BME | Mercaptoethanol | 3 |
| DB00171 | ATP | ATP | 2 |
| DB03869 | SSA | 5'-O-(L-Serylsulfamoyl)adenosine | 2 |
| DB03909 | ACP | Adenosine-5'-[Beta, Gamma-Methylene]Triphosphate | 2 |
| DB00133 | SER | Serine | 1 |
| DB00145 | GLY | Glycine | 1 |
| DB14078 | MDN | Medronic acid | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| A5A | '5'-O-(N-(L-ALANYL)-SULFAMOYL)ADENOSINE | 23 |
| HED | 2-HYDROXYETHYL DISULFIDE | 9 |
| MGmetal | MAGNESIUM ION | 7 |
| ZNmetal | ZINC ION | 5 |
| ALA | ALANINE | 3 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 3 |
| G5A | 5'-O-(glycylsulfamoyl)adenosine | 3 |
| ACP | PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER | 2 |
| BME | BETA-MERCAPTOETHANOL | 2 |
| SSA | 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE | 2 |
| 5AL | 5'-O-[(R)-{[(2S)-2-aminopropanoyl]oxy}(hydroxy)phosphoryl]adenosine | 1 |
| 8X1 | 5'-O-{[(2S)-azetidine-2-carbonyl]sulfamoyl}adenosine | 1 |
| GLY | GLYCINE | 1 |
| MDN | METHYLENEDIPHOSPHONIC ACID | 1 |
| SER | SERINE | 1 |