F-group (family)

3156.1.1.9 Cu-oxidase_3

Open in classification tree →Pfam PF07732 →

Ligands and drugs

1,514

Member domains

990

with ligand contacts (≤ 4 Å)

65.4% of members

863

with DrugDomain annotations

57.0% of members

501

with a DrugBank compound

33.1% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 3156.1.1.9 belongs to X-group 3156 Cupredoxin-like, which binds 7.4 ligand superclasses per 20 proteins, narrower than 55% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBank	PDB ligand	Name	Domains
DB09140	OXY	Oxygen	124
DB12529	NO2	Nitrite	78
DB00141	NAG	N-Acetylglucosamine	68
DB14522	OH	Hydroxide ion	39
DB00145	GLY	Glycine	8
DB00139	SIN	Succinic acid	6
DB02736	ACM	Acetamide	6
DB11091	PEO	Hydrogen peroxide	5
DB09130	—	—	3
DB01373	—	—	2
DB01592	—	—	2
DB01593	—	—	2
DB02412	PYE	Tetrahydropyran	2
DB03556	PE5	2-(2-{2-[2-(2-{2-[2-(2-Ethoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethanol, Polyethyleneglycol Peg400	2
DB06690	N2O	Nitrous oxide	2
DB12965	—	—	2
DB14487	—	—	2
DB14488	—	—	2
DB14489	—	—	2
DB14490	—	—	2

Most frequently bound compounds

PDB ligand	Name	Domains in contact
CUmetal	COPPER (II) ION	927
OXY	OXYGEN MOLECULE	143
NO2	NITRITE ION	82
NAG	2-acetamido-2-deoxy-beta-D-glucopyranose	68
CL	CHLORIDE ION	49
CU1metal	COPPER (I) ION	46
C2O	CU-O-CU LINKAGE	45
OH	HYDROXIDE ION	40
CAmetal	CALCIUM ION	38
O	OXYGEN ATOM	37
NAmetal	SODIUM ION	33
MRD	(4R)-2-METHYLPENTANE-2,4-DIOL	25
ZNmetal	ZINC ION	24
PER	PEROXIDE ION	21
GLY	GLYCINE	15
NO	NITRIC OXIDE	13
C1O	CU-O LINKAGE	10
AZI	AZIDE ION	8
SIN	SUCCINIC ACID	8
ACM	ACETAMIDE	6