F-group (family)
323.1.1.3 AMP-binding
Ligands and drugs
5,090
Member domains
910
with ligand contacts (≤ 4 Å)
17.9% of members
606
with DrugDomain annotations
11.9% of members
379
with a DrugBank compound
7.4% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 323.1.1.3 belongs to X-group 323 CoA-dependent acyltransferases, which binds 9.6 ligand superclasses per 20 proteins, broader than 90% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00131 | AMP | Adenosine phosphate | 104 |
| DB00171 | ATP | ATP | 32 |
| DB01992 | COA | Coenzyme A | 29 |
| DB03230 | PRX | Adenosine-5'-Propylphosphate | 23 |
| DB03912 | PNS | D-pantetheine 4'-phosphate | 12 |
| DB02596 | APC | alpha,beta-Methyleneadenosine 5'-triphosphate | 9 |
| DB16833 | ADP | Adenosine disphosphate | 9 |
| DB03793 | BEZ | Benzoic acid | 7 |
| DB09459 | TLA | L-tartaric acid | 6 |
| DB03345 | BME | Mercaptoethanol | 5 |
| DB03644 | 3HA | 3-hydroxyanthranilic acid | 4 |
| DB14756 | SRT | meso-Tartaric acid | 4 |
| DB00156 | THR | Threonine | 3 |
| DB00161 | VAL | Valine | 3 |
| DB00936 | SAL | Salicylic acid | 3 |
| DB01786 | DAL | D-Alanine | 3 |
| DB08326 | — | 2-(6-HYDROXY-1,3-BENZOTHIAZOL-2-YL)-1,3-THIAZOL-4(5H)-ONE | 3 |
| DB09213 | IBP | Dexibuprofen | 3 |
| DB00117 | HIS | Histidine | 2 |
| DB00120 | PHE | Phenylalanine | 2 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| AMP | ADENOSINE MONOPHOSPHATE | 162 |
| MGmetal | MAGNESIUM ION | 105 |
| CL | CHLORIDE ION | 81 |
| CAmetal | CALCIUM ION | 49 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 45 |
| COA | COENZYME A | 43 |
| PRX | ADENOSINE-5'-MONOPHOSPHATE-PROPYL ESTER | 31 |
| ZNmetal | ZINC ION | 28 |
| 6R9 | [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] ethanoate | 19 |
| NAmetal | SODIUM ION | 19 |
| ANP | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | 18 |
| OLA | OLEIC ACID | 18 |
| Kmetal | POTASSIUM ION | 17 |
| APC | DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER | 16 |
| IOD | IODIDE ION | 16 |
| S0N | o-succinylbenzoyl-N-coenzyme A | 16 |
| SLU | 5'-O-[N-(DEHYDROLUCIFERYL)-SULFAMOYL] ADENOSINE | 14 |
| WTA | 5'-O-[(S)-ethoxy(hydroxy)phosphoryl]adenosine | 13 |
| OP3 | 7-methoxy-7-oxidanylidene-heptanoic acid | 12 |
| PN7 | N~3~-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-N-(2-sulfanylethyl)-beta-alaninamide | 12 |