T-group (topology)
327.3.1 GMP synthetase C-terminal dimerisation domain
Ligands and drugs
872
Member domains
138
with ligand contacts (≤ 4 Å)
15.8% of members
125
with DrugDomain annotations
14.3% of members
119
with a DrugBank compound
13.6% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 327.3.1 belongs to X-group 327 Alpha-lytic protease prodomain-like, which binds 7.9 ligand superclasses per 20 proteins, broader than 54% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02309 | XMP | 5-monophosphate-9-beta-D-ribofuranosyl xanthine | 12 |
| DB03227 | NMN | Nicotinamide Mononucleotide | 6 |
| DB01992 | COA | Coenzyme A | 5 |
| DB00131 | AMP | Adenosine phosphate | 4 |
| DB00142 | — | Glutamic acid | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| XMP | XANTHOSINE-5'-MONOPHOSPHATE | 16 |
| MNmetal | MANGANESE (II) ION | 12 |
| CAmetal | CALCIUM ION | 6 |
| CDmetal | CADMIUM ION | 6 |
| COmetal | COBALT (II) ION | 6 |
| CUmetal | COPPER (II) ION | 6 |
| FEmetal | FE (III) ION | 6 |
| NImetal | NICKEL (II) ION | 6 |
| NMN | BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE | 6 |
| SF4 | IRON/SULFUR CLUSTER | 6 |
| ZNmetal | ZINC ION | 6 |
| CL | CHLORIDE ION | 4 |
| MGmetal | MAGNESIUM ION | 4 |
| COA | COENZYME A | 3 |
| AMP | ADENOSINE MONOPHOSPHATE | 2 |
| IOD | IODIDE ION | 2 |