F-group (family)
327.5.1.3 AMP-binding_C_2
Ligands and drugs
81
Member domains
29
with ligand contacts (≤ 4 Å)
35.8% of members
30
with DrugDomain annotations
37.0% of members
22
with a DrugBank compound
27.2% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 327.5.1.3 belongs to X-group 327 Alpha-lytic protease prodomain-like, which binds 7.9 ligand superclasses per 20 proteins, broader than 54% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00131 | AMP | Adenosine phosphate | 12 |
| DB16833 | ADP | Adenosine disphosphate | 7 |
| DB01992 | COA | Coenzyme A | 5 |
| DB03345 | BME | Mercaptoethanol | 4 |
| DB00171 | ATP | ATP | 2 |
| DB09269 | PAC | Phenylacetic acid | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| AMP | ADENOSINE MONOPHOSPHATE | 11 |
| Kmetal | POTASSIUM ION | 8 |
| ADP | ADENOSINE-5'-DIPHOSPHATE | 7 |
| COA | COENZYME A | 5 |
| MGmetal | MAGNESIUM ION | 5 |
| BME | BETA-MERCAPTOETHANOL | 4 |
| DLL | 5'-O-[HYDROXY(PHENYLACETYL)PHOSPHORYL]ADENOSINE | 4 |
| UNL | Unknown ligand | 4 |
| 1ZZ | 5'-O-[(S)-(dodecanoyloxy)(hydroxy)phosphoryl]adenosine | 2 |
| 8LE | [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] 2-methyl-2-oxidanyl-propanoate | 2 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 2 |
| SCN | THIOCYANATE ION | 2 |
| 8LH | [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] (2~{R})-2-methyl-3-oxidanyl-propanoate | 1 |
| 8LQ | [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] (3~{S})-3-oxidanylbutanoate | 1 |
| A1JLN | [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] 3-azanyl-4-oxidanyl-benzoate | 1 |
| A1JOG | 3-amino-4-hydroxybenzoic acid | 1 |
| PAC | 2-PHENYLACETIC ACID | 1 |
| ZNmetal | ZINC ION | 1 |