T-group (topology)
3390.1.1 Photosystem II reaction center protein T, PsbT
Ligands and drugs
420
Member domains
333
with ligand contacts (≤ 4 Å)
79.3% of members
235
with DrugDomain annotations
56.0% of members
226
with a DrugBank compound
53.8% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 3390.1.1 belongs to X-group 3390 Photosystem II reaction center protein T, PsbT, which has 16 proteins with classified ligands. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB06755 | BCR | Beta carotene | 217 |
| DB02043 | LHG | 1,2-Dipalmitoyl-Phosphatidyl-Glycerole | 54 |
| DB02133 | CLA | Chlorophyll A | 48 |
| DB03193 | STE | Stearic acid | 42 |
| DB03426 | DGD | Digalactosyl Diacyl Glycerol (Dgdg) | 13 |
| DB04735 | MGE | Monogalactosyldiacylglycerol | 10 |
| DB03279 | LMU | Dodecyl-Alpha-D-Maltoside | 2 |
| DB00132 | LNL | alpha-Linolenic acid | 1 |
| DB04450 | HTG | Heptyl 1-Thiohexopyranoside | 1 |
| DB04464 | FME | N-Formylmethionine | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| PL9 | 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE | 314 |
| LHG | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | 296 |
| SQD | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL | 294 |
| CLA | CHLOROPHYLL A | 289 |
| BCR | BETA-CAROTENE | 287 |
| LMG | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE | 58 |
| STE | STEARIC ACID | 53 |
| UNL | Unknown ligand | 47 |
| DGD | DIGALACTOSYL DIACYL GLYCEROL (DGDG) | 16 |
| 3PH | 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE | 12 |
| 8CT | (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene | 12 |
| C7Z | (1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol | 11 |
| MGE | (1S)-2-(ALPHA-L-ALLOPYRANOSYLOXY)-1-[(TRIDECANOYLOXY)METHYL]ETHYL PALMITATE | 10 |
| WVN | 1,3,3-trimethyl-2-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-3,7,12,16-tetramethyl-18-[(1R)-2,6,6-trimethylcyclohex-2-en-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohexene | 4 |
| LFA | EICOSANE | 3 |
| CL7 | CHLOROPHYLL D | 2 |
| IOD | IODIDE ION | 2 |
| LMU | DODECYL-ALPHA-D-MALTOSIDE | 2 |
| LNL | ALPHA-LINOLENIC ACID | 2 |
| FME | N-FORMYLMETHIONINE | 1 |