X-group (possible homology)

352 Noncollagenous (NC1) domain of collagen IV

Ligands and drugs

293
Member domains
170
with ligand contacts (≤ 4 Å)
58.0% of members
164
with DrugDomain annotations
56.0% of members
67
with a DrugBank compound
22.9% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

ClassyFire chemical superclasses of the ligands bound by this X-group's proteins, from DrugDomain annotations.

8
Proteins with classified ligands
3
Superclasses bound (of 23)
—
Superclasses per 20 proteins
fewer than 20 proteins: too few to compare at equal depth

The raw number of superclasses rises with the number of proteins sampled; the per-20 value compares X-groups at equal depth.

SuperclassProteinsExpected
0.25×observed / expected4×
RatioSignificance
Homogeneous non-metal compounds81.74.71×not tested
Organic oxygen compounds21.61.27×not tested
Homogeneous metal compounds43.91.03×not tested
enriched (q < 0.05)depleted (q < 0.05)not significantnot tested (expected < 5)

Unit: a protein (UniProt accession) with a ligand-binding domain in this X-group, counted once per superclass. Expected counts use each superclass's frequency across all ligand-binding X-groups; significance is Fisher's exact test with Benjamini–Hochberg correction. Buffers and crystallization additives are excluded. ECOD v295.2; the method follows the ECOD 2027 update, whose published figures used a slightly different artifact filter.

DrugBank compounds

No DrugBank compounds are annotated on this group's domains.

Most frequently bound compounds

PDB ligandNameDomains in contact
CLCHLORIDE ION99
KmetalPOTASSIUM ION52
BRBROMIDE ION24
CAmetalCALCIUM ION6
LUmetalLUTETIUM (III) ION4
MGmetalMAGNESIUM ION4
P6GHEXAETHYLENE GLYCOL3