X-group (possible homology)

3832 Tumor necrosis factor alpha-induced protein 8-like protein 2

Ligands and drugs

82
Member domains
7
with ligand contacts (≤ 4 Å)
8.5% of members
7
with DrugDomain annotations
8.5% of members
4
with a DrugBank compound
4.9% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

ClassyFire chemical superclasses of the ligands bound by this X-group's proteins, from DrugDomain annotations.

5
Proteins with classified ligands
2
Superclasses bound (of 23)
—
Superclasses per 20 proteins
fewer than 20 proteins: too few to compare at equal depth

The raw number of superclasses rises with the number of proteins sampled; the per-20 value compares X-groups at equal depth.

SuperclassProteinsExpected
0.25×observed / expected4×
RatioSignificance
Lipids and lipid-like molecules30.65.46×not tested
Homogeneous non-metal compounds21.11.89×not tested
enriched (q < 0.05)depleted (q < 0.05)not significantnot tested (expected < 5)

Unit: a protein (UniProt accession) with a ligand-binding domain in this X-group, counted once per superclass. Expected counts use each superclass's frequency across all ligand-binding X-groups; significance is Fisher's exact test with Benjamini–Hochberg correction. Buffers and crystallization additives are excluded. ECOD v295.2; the method follows the ECOD 2027 update, whose published figures used a slightly different artifact filter.

DrugBank compounds

DrugBankPDB ligandNameDomains
DB01728PEF1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolamine2
DB02043LHG1,2-Dipalmitoyl-Phosphatidyl-Glycerole2

Most frequently bound compounds

PDB ligandNameDomains in contact
CLCHLORIDE ION3
6OU[(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate2
LHG1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE2
NAmetalSODIUM ION2
PEFDI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE2