F-group (family)

386.1.1.1 zf-C2H2

Open in classification tree →Pfam PF00096 →

Ligands and drugs

7,857

Member domains

623

with ligand contacts (≤ 4 Å)

7.9% of members

341

with DrugDomain annotations

4.3% of members

with a DrugBank compound

0.3% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 386.1.1.1 belongs to X-group 386 beta-beta-alpha zinc fingers, which binds 3.9 ligand superclasses per 20 proteins, narrower than 91% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBank	PDB ligand	Name	Domains
DB02884	—	3-Cyclohexyl-L-alanine	5
DB05483	—	Picolinic acid	5
DB11326	BO3	Boric acid	1
DB12101	8W7	Iberdomide	1
DB17584	QFC	Mezigdomide	1

Most frequently bound compounds

PDB ligand	Name	Domains in contact
ZNmetal	ZINC ION	621
MGmetal	MAGNESIUM ION	10
Y70	S-Pomalidomide	9
RN9	3-[3-[[1-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-2,5-bis(oxidanylidene)pyrrol-3-yl]amino]phenyl]-~{N}-(3-chloranyl-4-methyl-phenyl)propanamide	4
8W7	(3S)-3-[4-({4-[(morpholin-4-yl)methyl]phenyl}methoxy)-1-oxo-1,3-dihydro-2H-isoindol-2-yl]piperidine-2,6-dione	3
LWK	(3S)-3-[5-(1-benzylpiperidin-4-yl)-1-oxo-1,3-dihydro-2H-isoindol-2-yl]piperidine-2,6-dione	3
CAmetal	CALCIUM ION	2
CL	CHLORIDE ION	2
COmetal	COBALT (II) ION	2
MIQ	2-[(3S)-2,6-dioxopiperidin-3-yl]-5-(morpholin-4-yl)-1H-isoindole-1,3(2H)-dione	2
NAmetal	SODIUM ION	2
QFC	Mezigdomide	2
85C	1-(3-chloro-4-methylphenyl)-3-({2-[(3S)-2,6-dioxopiperidin-3-yl]-1-oxo-2,3-dihydro-1H-isoindol-5-yl}methyl)urea	1
A1CEK	N-{2-[(3S)-2,6-dioxopiperidin-3-yl]-1-oxo-2,3-dihydro-1H-isoindol-5-yl}benzamide	1
BO3	BORIC ACID	1
EF2	S-Thalidomide	1
F4U	2-[(3~{S})-2,6-bis(oxidanylidene)piperidin-3-yl]-5-oxidanyl-isoindole-1,3-dione	1
Kmetal	POTASSIUM ION	1