T-group (topology)
389.1.3 TNF receptor-like
Ligands and drugs
1,573
Member domains
190
with ligand contacts (≤ 4 Å)
12.1% of members
190
with DrugDomain annotations
12.1% of members
135
with a DrugBank compound
8.6% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 389.1.3 belongs to X-group 389 EGF-like, which binds 4.9 ligand superclasses per 20 proteins, narrower than 85% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00141 | NAG | N-Acetylglucosamine | 75 |
| DB00142 | — | Glutamic acid | 4 |
| DB00168 | — | Aspartame | 2 |
| DB05959 | — | — | 2 |
| DB00127 | — | Spermine | 1 |
| DB00659 | — | — | 1 |
| DB02772 | — | — | 1 |
| DB03507 | 703 | 6-[3-(4-Morpholinyl)Propyl]-2-(3-Nitrophenyl)-5-Thioxo-5,6,-Dihydro-7h-Thienol[2',3':4,5]Pyrrolo[1,2-C]Imidazol-7-One | 1 |
| DB04256 | — | (S)-alpha-methyl-4-carboxyphenylglycine | 1 |
| DB05255 | — | — | 1 |
| DB06201 | — | — | 1 |
| DB11093 | — | — | 1 |
| DB11348 | — | — | 1 |
| DB12733 | — | — | 1 |
| DB12865 | — | — | 1 |
| DB14481 | — | — | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | 73 |
| CL | CHLORIDE ION | 22 |
| NAmetal | SODIUM ION | 15 |
| MGmetal | MAGNESIUM ION | 9 |
| COmetal | COBALT (II) ION | 7 |
| CAmetal | CALCIUM ION | 4 |
| Kmetal | POTASSIUM ION | 3 |
| 29N | 1,1',1''-(1,3,5-triazinane-1,3,5-triyl)tripropan-1-one | 2 |
| CDmetal | CADMIUM ION | 2 |
| 703 | 5-(3-MORPHOLIN-4-YL-PROPYL)-2-(3-NITRO-PHENYL)-4-THIOXO-4,5-DIHYDRO-1-THIA-3B,5-DIAZA-CYCLOPENTA[A]PENTALEN-6-ONE | 1 |