T-group (topology)
3921.1.1 Na(+)-translocating NADH-quinone reductase subunit D
Ligands and drugs
462
Member domains
78
with ligand contacts (≤ 4 Å)
16.9% of members
36
with DrugDomain annotations
7.8% of members
13
with a DrugBank compound
2.8% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 3921.1.1 belongs to X-group 3921 Na(+)-translocating NADH-quinone reductase subunit D, which has 8 proteins with classified ligands. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB03247 | FMN | Flavin mononucleotide | 12 |
| DB00123 | LYS | Lysine | 2 |
| DB04327 | PEE | Phosphatidylethanolamine | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| FES | FE2/S2 (INORGANIC) CLUSTER | 76 |
| 3PE | 1,2-Distearoyl-sn-glycerophosphoethanolamine | 12 |
| FMN | FLAVIN MONONUCLEOTIDE | 10 |
| NAmetal | SODIUM ION | 6 |
| PTY | PHOSPHATIDYLETHANOLAMINE | 6 |
| CAmetal | CALCIUM ION | 2 |
| FEmetal | FE (III) ION | 2 |
| LYS | LYSINE | 2 |
| PEE | 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine | 2 |