T-group (topology)
396.1.1 Retrovirus zinc finger-related domains
Ligands and drugs
198
Member domains
80
with ligand contacts (≤ 4 Å)
40.4% of members
61
with DrugDomain annotations
30.8% of members
3
with a DrugBank compound
1.5% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 396.1.1 belongs to X-group 396 CCHC-type 1 zinc finger, which binds 4.3 ligand superclasses per 20 proteins, narrower than 89% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB01972 | 5GP | Guanosine-5'-Monophosphate | 1 |
| DB03403 | C5P | Cytidine-5'-Monophosphate | 1 |
| DB03685 | U5P | Uridine monophosphate | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ZNmetal | ZINC ION | 80 |
| IOD | IODIDE ION | 3 |
| 1HF | (3E)-3-{(2Z)-[(5Z)-5-(furan-2-ylmethylidene)-4-oxo-1,3-thiazolidin-2-ylidene]hydrazinylidene}-2-oxo-2,3-dihydro-1H-indole-5-sulfonic acid | 2 |
| UPU | [(2R,3S,4R,5R)-5-(2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL (2R,3S,4R,5R)-5-(2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)-4-HYDROXY-2-(HYDROXYMETHYL)TETRAHYDROFURAN-3-YL HYDROGEN (S)-PHOSPHATE | 2 |
| 5GP | GUANOSINE-5'-MONOPHOSPHATE | 1 |
| MNmetal | MANGANESE (II) ION | 1 |