F-group (family)
4019.1.1.1 Beta-lactamase
Ligands and drugs
989
Member domains
603
with ligand contacts (≤ 4 Å)
61.0% of members
558
with DrugDomain annotations
56.4% of members
359
with a DrugBank compound
36.3% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 4019.1.1.1 belongs to X-group 4019 alpha-helical domain in beta-lactamase/transpeptidase-like proteins, which binds 8.4 ligand superclasses per 20 proteins, broader than 65% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00145 | GLY | Glycine | 12 |
| DB00513 | ACA | Aminocaproic acid | 10 |
| DB08551 | SM2 | 3-{(R)-(Dihydroxyboryl)[(2-thienylacetyl)amino]methyl}benzoic acid | 10 |
| DB08375 | CEF | (2R)-2-[(1R)-1-[[(2Z)-2-(2-Amino-1,3-thiazol-4-yl)-2-methoxyiminoacetyl]amino]-2-oxoethyl]-5-methylidene-2H-1,3-thiazine-4-carboxylic acid | 9 |
| DB03530 | CAZ | Acylated ceftazidime | 8 |
| DB01896 | APB | M-Aminophenylboronic Acid | 7 |
| DB04360 | BZB | Benzo[B]Thiophene-2-Boronic Acid | 7 |
| DB00120 | PHE | Phenylalanine | 6 |
| DB04029 | NFA | Phenylalanylamide | 6 |
| DB08552 | SM3 | (1R)-1-(2-thienylacetylamino)-1-phenylmethylboronic acid | 6 |
| DB00131 | AMP | Adenosine phosphate | 5 |
| DB02556 | DPN | D-Phenylalanine | 5 |
| DB03570 | 144 | Tris-Hydroxymethyl-Methyl-Ammonium | 5 |
| DB04035 | CB4 | Ceftazidime BATSI | 5 |
| DB00139 | SIN | Succinic acid | 4 |
| DB02588 | MOX | (2R)-2-[(1R)-1-{[(2S)-2-Carboxy-2-(4-hydroxyphenyl)acetyl]amino}-1-methoxy-2-oxoethyl]-5-methylene-5,6-dihydro-2H-1,3-oxazine-4-carboxylic acid | 4 |
| DB03834 | TBE | (3S)-3-(dioxidosulfanyl)-N-[(1Z)-3-oxoprop-1-en-1-yl]-4-(1H-1,2,3-triazol-1-yl)-D-valine | 4 |
| DB00355 | AZR | Aztreonam | 3 |
| DB03785 | LVA | Mevinolinic acid | 3 |
| DB09459 | TLA | L-tartaric acid | 3 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CL | CHLORIDE ION | 31 |
| BAmetal | BARIUM ION | 23 |
| ZNmetal | ZINC ION | 17 |
| NAmetal | SODIUM ION | 16 |
| CAmetal | CALCIUM ION | 14 |
| YDB | 1-[(2R)-2-{2-[(5-amino-1,3,4-thiadiazol-2-yl)sulfanyl]acetamido}-2-boronoethyl]-1H-1,2,3-triazole-4-carboxylic acid | 13 |
| GLY | GLYCINE | 12 |
| ACA | 6-AMINOHEXANOIC ACID | 10 |
| NXL | (2S,5R)-1-formyl-5-[(sulfooxy)amino]piperidine-2-carboxamide | 10 |
| SM2 | (1R)-1-(2-THIENYLACETYLAMINO)-1-(3-CARBOXYPHENYL)METHYLBORONIC ACID | 10 |
| CAZ | ACYLATED CEFTAZIDIME | 9 |
| Kmetal | POTASSIUM ION | 8 |
| MHH | methyl hydrogen (R)-hexylphosphonate | 8 |
| P8K | hexyl(octoxy)phosphinic acid | 8 |
| APB | M-AMINOPHENYLBORONIC ACID | 7 |
| BZB | BENZO[B]THIOPHENE-2-BORONIC ACID | 7 |
| TLA | L(+)-TARTARIC ACID | 7 |
| ZXM | 1-{(2R)-2-(dihydroxyboranyl)-2-[(thiophen-2-ylacetyl)amino]ethyl}-1H-1,2,3-triazole-4-carboxylic acid | 7 |
| NFA | PHENYLALANINE AMIDE | 6 |
| PHE | PHENYLALANINE | 6 |