T-group (topology)
4024.1.1 Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit
Ligands and drugs
310
Member domains
299
with ligand contacts (≤ 4 Å)
96.5% of members
219
with DrugDomain annotations
70.6% of members
75
with a DrugBank compound
24.2% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 4024.1.1 belongs to X-group 4024 Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit, which has 16 proteins with classified ligands. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02175 | MLA | Malonic acid | 6 |
| DB18267 | HEM | Ferroheme | 4 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| SF4 | IRON/SULFUR CLUSTER | 279 |
| F3S | FE3-S4 CLUSTER | 236 |
| CL | CHLORIDE ION | 75 |
| MQ9 | MENAQUINONE-9 | 16 |
| CAmetal | CALCIUM ION | 6 |
| MLA | MALONIC ACID | 6 |
| H2S | HYDROSULFURIC ACID | 4 |
| VK3 | MENADIONE | 4 |
| SOT | morpholine-4-sulfonic acid | 3 |
| 35L | IRON/SULFUR CLUSTER | 2 |
| MRD | (4R)-2-METHYLPENTANE-2,4-DIOL | 2 |
| NAmetal | SODIUM ION | 2 |
| KR | KRYPTON | 1 |
| MGmetal | MAGNESIUM ION | 1 |