F-group (family)
4025.1.1.1 Complex1_49kDa
Ligands and drugs
883
Member domains
164
with ligand contacts (≤ 4 Å)
18.6% of members
78
with DrugDomain annotations
8.8% of members
10
with a DrugBank compound
1.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 4025.1.1.1 belongs to X-group 4025 alpha-helical domain in nickel-iron hydrogenase, large subunit, which binds 10.1 ligand superclasses per 20 proteins, broader than 95% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02043 | LHG | 1,2-Dipalmitoyl-Phosphatidyl-Glycerole | 3 |
| DB07640 | DCQ | 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione | 3 |
| DB11457 | 970 | Rotenone | 2 |
| DB00157 | — | NADH | 1 |
| DB08689 | UQ1 | Ubiquinone Q1 | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| SF4 | IRON/SULFUR CLUSTER | 153 |
| PC1 | 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE | 44 |
| 3PE | 1,2-Distearoyl-sn-glycerophosphoethanolamine | 37 |
| 970 | (2R,6aS,12aS)-8,9-dimethoxy-2-(prop-1-en-2-yl)-1,2,12,12a-tetrahydrofuro[2',3':7,8][1]benzopyrano[2,3-c][1]benzopyran-6(6aH)-one | 6 |
| U10 | UBIQUINONE-10 | 6 |
| PTY | PHOSPHATIDYLETHANOLAMINE | 5 |
| DCQ | 2-decyl-5,6-dimethoxy-3-methylcyclohexa-2,5-diene-1,4-dione | 4 |
| HQH | Piericidin A | 2 |
| HQW | Aureothin | 2 |
| LHG | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | 2 |
| MGmetal | MAGNESIUM ION | 2 |
| MNmetal | MANGANESE (II) ION | 2 |
| MQ9 | MENAQUINONE-9 | 2 |
| PEV | (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE | 2 |
| A1JBT | (7~{S})-7-[(2~{S})-1-(6-azanylpurin-3-yl)propan-2-yl]-3-methyl-6,7,8,9-tetrahydro-5~{a}~{H}-pyrano[4,3-b]chromen-1-one | 1 |
| HQK | Pyridaben | 1 |
| NAmetal | SODIUM ION | 1 |
| PL9 | 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE | 1 |
| PLX | (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL | 1 |
| UQ | Coenzyme Q10, (2Z,6E,10Z,14E,18E,22E,26Z)-isomer | 1 |