F-group (family)
4025.1.1.2 NiFeSe_Hases
Ligands and drugs
308
Member domains
272
with ligand contacts (≤ 4 Å)
88.3% of members
235
with DrugDomain annotations
76.3% of members
114
with a DrugBank compound
37.0% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 4025.1.1.2 belongs to X-group 4025 alpha-helical domain in nickel-iron hydrogenase, large subunit, which binds 10.1 ligand superclasses per 20 proteins, broader than 95% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB09140 | OXY | Oxygen | 12 |
| DB11588 | CMO | Carbon monoxide | 10 |
| DB00145 | GLY | Glycine | 5 |
| DB02219 | CXS | 3-(cyclohexylamino)propanesulfonic acid | 1 |
| DB02643 | C15 | N-Dodecyl-N,N-Dimethyl-3-Ammonio-1-Propanesulfonate | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| F3S | FE3-S4 CLUSTER | 214 |
| SF4 | IRON/SULFUR CLUSTER | 197 |
| CL | CHLORIDE ION | 50 |
| H2S | HYDROSULFURIC ACID | 28 |
| MGmetal | MAGNESIUM ION | 21 |
| 6ML | oxygen-damaged SF4 | 19 |
| SF3 | FE4-S3 CLUSTER | 9 |
| F4S | FE4-S3 CLUSTER | 7 |
| ER2 | Fe4S4 | 6 |
| LImetal | LITHIUM ION | 6 |
| OXY | OXYGEN MOLECULE | 6 |
| FEmetal | FE (III) ION | 5 |
| FSX | BIS-(MU-2-OXO),[(MU-3--SULFIDO)-BIS(MU-2--SULFIDO)-TRIS(CYS-S)-TRI-IRON] (AQUA)(GLU-O)IRON(II) | 5 |
| GLY | GLYCINE | 5 |
| KR | KRYPTON | 5 |
| NAmetal | SODIUM ION | 5 |
| 8JU | FE4-S4-O CLUSTER | 4 |
| MRD | (4R)-2-METHYLPENTANE-2,4-DIOL | 3 |
| S3F | oxidized [Fe4-S3] cluster | 3 |
| A1H6N | 2-[[2-[2-[2-[bis(2-hydroxy-2-oxoethyl)amino]phenoxy]ethoxy]phenyl]-(2-hydroxy-2-oxoethyl)amino]ethanoic acid | 2 |