F-group (family)
4043.1.1.2 RNA_pol_Rpb2_7
Ligands and drugs
339
Member domains
96
with ligand contacts (≤ 4 Å)
28.3% of members
27
with DrugDomain annotations
8.0% of members
3
with a DrugBank compound
0.9% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 4043.1.1.2 belongs to X-group 4043 C-terminal domain in beta subunit of DNA dependent RNA-polymerase, which binds 7.7 ligand superclasses per 20 proteins, broader than 51% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB08266 | NE6 | Methyl [(1E,5R)-5-{3-[(2E,4E)-2,5-dimethyl-2,4-octadienoyl]-2,4-dioxo-3,4-dihydro-2H-pyran-6-yl}hexylidene]carbamate | 2 |
| DB01201 | RPT | Rifapentine | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ZNmetal | ZINC ION | 88 |
| MGmetal | MAGNESIUM ION | 6 |
| NE6 | methyl [(1E,5R)-5-{(3S)-3-[(2E,4E)-2,5-dimethylocta-2,4-dienoyl]-2,4-dioxo-3,4-dihydro-2H-pyran-6-yl}hexylidene]carbamate | 2 |
| RPT | RIFAPENTINE | 1 |