T-group (topology)
4044.1.1 Helical bundle domain in prismane-like proteins
Ligands and drugs
737
Member domains
291
with ligand contacts (≤ 4 Å)
39.5% of members
158
with DrugDomain annotations
21.4% of members
54
with a DrugBank compound
7.3% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 4044.1.1 belongs to X-group 4044 Helical bundle domain in prismane-like proteins, which has 12 proteins with classified ligands. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB14522 | OH | Hydroxide ion | 3 |
| DB09157 | CO2 | Carbon dioxide | 2 |
| DB01826 | NBN | N-Butyl Isocyanide | 1 |
| DB02078 | PG5 | Triglyme | 1 |
| DB02580 | PG6 | Pentaglyme | 1 |
| DB11588 | CMO | Carbon monoxide | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| SF4 | IRON/SULFUR CLUSTER | 218 |
| XCC | FE(4)-NI(1)-S(4) CLUSTER | 50 |
| XE | XENON | 14 |
| CL | CHLORIDE ION | 8 |
| CMO | CARBON MONOXIDE | 8 |
| CO2 | CARBON DIOXIDE | 8 |
| NFS | FE(4)-NI(1)-S(5) CLUSTER | 8 |
| OH | HYDROXIDE ION | 8 |
| FEmetal | FE (III) ION | 6 |
| FES | FE2/S2 (INORGANIC) CLUSTER | 6 |
| MGmetal | MAGNESIUM ION | 6 |
| UW8 | 2-[3,8,8,12,12-pentakis(2-hydroxy-2-oxoethyl)-2,7,11-tris(oxidanylidene)-1,4,6,9,10,13-hexaoxa-5$l^{6}-titanaspiro[4.4^{5}.4^{5}]tridecan-3-yl]ethanoic acid | 6 |
| CYN | CYANIDE ION | 5 |
| BR | BROMIDE ION | 4 |
| MRD | (4R)-2-METHYLPENTANE-2,4-DIOL | 4 |
| CAmetal | CALCIUM ION | 3 |
| F | FLUORIDE ION | 2 |
| HOA | HYDROXYAMINE | 2 |
| Kmetal | POTASSIUM ION | 2 |
| NAmetal | SODIUM ION | 2 |