4136 Coronavirus NSP10-like
Ligands and drugs
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
ClassyFire chemical superclasses of the ligands bound by this X-group's proteins, from DrugDomain annotations.
The raw number of superclasses rises with the number of proteins sampled; the per-20 value compares X-groups at equal depth.
| Superclass | Proteins | Expected | 0.25×observed / expected4× | Ratio | Significance |
|---|---|---|---|---|---|
| Organic nitrogen compounds | 1 | 0.3 | 3.53× | not tested | |
| Homogeneous metal compounds | 9 | 4.4 | 2.07× | not tested | |
| Homogeneous non-metal compounds | 2 | 1.9 | 1.05× | not tested | |
| Organoheterocyclic compounds | 1 | 1.4 | 0.73× | not tested | |
| Organic oxygen compounds | 1 | 1.8 | 0.57× | not tested |
Unit: a protein (UniProt accession) with a ligand-binding domain in this X-group, counted once per superclass. Expected counts use each superclass's frequency across all ligand-binding X-groups; significance is Fisher's exact test with Benjamini–Hochberg correction. Buffers and crystallization additives are excluded. ECOD v295.2; the method follows the ECOD 2027 update, whose published figures used a slightly different artifact filter.
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02561 | BDF | Beta-D-Fructopyranose | 3 |
| DB03254 | PIM | 4-Phenyl-1h-Imidazole | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ZNmetal | ZINC ION | 215 |
| CL | CHLORIDE ION | 16 |
| NAmetal | SODIUM ION | 9 |
| BDF | beta-D-fructopyranose | 3 |
| 2AQ | QUINOLIN-2-AMINE | 1 |
| 7WA | 1H-benzimidazol-4-amine | 1 |
| A1IGI | N,N-dimethyl-3-oxidanyl-benzamide | 1 |
| A1IGJ | 5,6,7,8-tetrahydro-[1,2,4]triazolo[4,3-a]pyridine | 1 |
| A1IGK | N-methylbenzamide | 1 |
| A1IGL | (4R)-4-phenyl-1,3-oxazolidin-2-one | 1 |
| A1IGM | 1-methylpyrrole-2-carboxamide | 1 |
| A1IGN | 1-methyl-1-(phenylmethyl)urea | 1 |
| A1IGO | 3-phenylthiophene-2-carboxamide | 1 |
| A1IGP | (3-oxidanylazetidin-1-yl)-phenyl-methanone | 1 |
| A1IGQ | (4R)-4-phenyl-1,2-thiazolidine 1,1-dioxide | 1 |
| A1IGR | 1H-indole-3-carboxamide | 1 |
| A1IGT | (4S)-4-pyridin-4-ylpyrrolidin-2-one | 1 |
| MI7 | 7-METHOXY-1H-INDAZOLE | 1 |
| PIM | 4-PHENYL-1H-IMIDAZOLE | 1 |
| VSL | methyl 4,5,6,7-tetrahydro-2H-indazole-3-carboxylate | 1 |