X-group (possible homology)

4356 Coronavirus nsp1

Ligands and drugs

165
Member domains
26
with ligand contacts (≤ 4 Å)
15.8% of members
6
with DrugDomain annotations
3.6% of members
1
with a DrugBank compound
0.6% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

ClassyFire chemical superclasses of the ligands bound by this X-group's proteins, from DrugDomain annotations.

1
Proteins with classified ligands
2
Superclasses bound (of 23)
—
Superclasses per 20 proteins
fewer than 20 proteins: too few to compare at equal depth

The raw number of superclasses rises with the number of proteins sampled; the per-20 value compares X-groups at equal depth.

SuperclassProteinsExpected
0.25×observed / expected4×
RatioSignificance
Benzenoids10.114×not tested
Organoheterocyclic compounds10.26.59×not tested
enriched (q < 0.05)depleted (q < 0.05)not significantnot tested (expected < 5)

Unit: a protein (UniProt accession) with a ligand-binding domain in this X-group, counted once per superclass. Expected counts use each superclass's frequency across all ligand-binding X-groups; significance is Fisher's exact test with Benjamini–Hochberg correction. Buffers and crystallization additives are excluded. ECOD v295.2; the method follows the ECOD 2027 update, whose published figures used a slightly different artifact filter.

DrugBank compounds

DrugBankPDB ligandNameDomains
DB0729292G4-(2-amino-1,3-thiazol-4-yl)phenol1

Most frequently bound compounds

PDB ligandNameDomains in contact
92G4-(2-amino-1,3-thiazol-4-yl)phenol1
A1CEI5-(4-bromophenyl)-1H-tetrazole1
A1CEJ3-methylnaphthalen-2-ol1
A1CRA4-(2-aminoethyl)-2-iodophenol1
A1CRB2,2,2-trifluoro-1-(1-methyl-1H-imidazol-2-yl)ethan-1-one1
A1CS0(2-bromo-1,4-phenylene)dimethanol1
A1CS1(3S)-3-(4-hydroxyphenyl)piperazin-2-one1
A1CS22-[(1-methylcyclobutyl)sulfanyl]benzoic acid1
A1CS3methyl (1S)-2-oxocyclopentane-1-carboxylate1
A1CS4(4-bromanyl-5-methyl-thiophen-2-yl)-oxidanyl-oxidanylidene-boron1
A1CS5N,N'-(pyridine-2,6-diyl)diacetamide1
A1H0G1-benzothiophen-5-amine1
A1H0J(1~{R})-1-(4-iodophenyl)ethanamine1
A1H0K6-iodanyl-2,3-dihydro-1,3-benzothiazol-2-amine1
A1H0L2-(1-benzothiophen-3-yl)ethanoic acid1
A1H0M6-bromanyl-1,3-benzothiazol-2-amine1
A1H0N(1~{R})-1-(4-bromophenyl)ethanamine1
ABV1,3-benzothiazol-2-amine1
EQT4-chloranyl-1~{H}-indazol-3-amine1
FBB6-fluoro-1,3-benzothiazol-2-amine1