T-group (topology)
4952.1.1 L-aspartase N-terminal domain-like
Ligands and drugs
1,872
Member domains
333
with ligand contacts (≤ 4 Å)
17.8% of members
269
with DrugDomain annotations
14.4% of members
201
with a DrugBank compound
10.7% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 4952.1.1 belongs to X-group 4952 L-aspartase N-terminal domain-like, which binds 7.4 ligand superclasses per 20 proteins, narrower than 54% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00131 | AMP | Adenosine phosphate | 29 |
| DB01677 | FUM | Fumaric acid | 21 |
| DB04066 | HC4 | p-Coumaric acid | 16 |
| DB18313 | TCA | Cinnamic acid | 14 |
| DB02267 | AS1 | Argininosuccinate | 13 |
| DB01880 | DHC | 3,4-Dihydroxycinnamic Acid | 8 |
| DB04418 | 2SA | Adenylosuccinic acid | 8 |
| DB01700 | AMZ | AICA ribonucleotide | 4 |
| DB03345 | BME | Mercaptoethanol | 4 |
| DB00125 | ARG | Arginine | 3 |
| DB00128 | ASP | Aspartic acid | 3 |
| DB00135 | TYR | Tyrosine | 2 |
| DB02024 | HCI | 3-phenylpropionic acid | 2 |
| DB02749 | PMA | Pyromellitic Acid | 2 |
| DB03452 | SIF | 3-Trimethylsilylsuccinic Acid | 2 |
| DB04447 | DTT | 1,4-Dithiothreitol | 2 |
| DB14756 | SRT | meso-Tartaric acid | 2 |
| DB00117 | — | Histidine | 1 |
| DB00120 | PHE | Phenylalanine | 1 |
| DB00139 | SIN | Succinic acid | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CL | CHLORIDE ION | 52 |
| FUM | FUMARIC ACID | 31 |
| AMP | ADENOSINE MONOPHOSPHATE | 29 |
| AS1 | ARGININOSUCCINATE | 22 |
| HC4 | 4'-HYDROXYCINNAMIC ACID | 16 |
| TCA | PHENYLETHYLENECARBOXYLIC ACID | 14 |
| LMR | (2S)-2-hydroxybutanedioic acid | 12 |
| ARG | ARGININE | 11 |
| PPH | [(1R)-1-amino-2-phenylethyl]phosphonic acid | 10 |
| 2SA | 2-[9-(3,4-DIHYDROXY-5-PHOSPHONOOXYMETHYL-TETRAHYDRO-FURAN-2-YL)-9H-PURIN-6-YLAMINO]-SUCCINIC ACID | 8 |
| BQ7 | (3S)-3-amino-2,2-difluoro-3-phenylpropanoic acid | 8 |
| DHC | CAFFEIC ACID | 8 |
| KZ5 | (2~{S})-2-(dimethylamino)-3-(2-sulfo-1~{H}-imidazol-4-yl)propanoic acid | 8 |
| PMI | (2-AMINO-2,3-DIHYDRO-1H-INDEN-2-YL)PHOSPHONIC ACID | 8 |
| SSS | N-{[5-AMINO-1-(5-O-PHOSPHONO-BETA-D-ARABINOFURANOSYL)-1H-IMIDAZOL-4-YL]CARBONYL}-L-ASPARTIC ACID | 7 |
| NAmetal | SODIUM ION | 5 |
| BME | BETA-MERCAPTOETHANOL | 4 |
| CAmetal | CALCIUM ION | 4 |
| COmetal | COBALT (II) ION | 4 |
| AMZ | AMINOIMIDAZOLE 4-CARBOXAMIDE RIBONUCLEOTIDE | 3 |