T-group (topology)
5.1.2 5-bladed
Ligands and drugs
1,527
Member domains
674
with ligand contacts (≤ 4 Å)
44.1% of members
545
with DrugDomain annotations
35.7% of members
422
with a DrugBank compound
27.6% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 5.1.2 belongs to X-group 5 beta-propeller-like, which binds 7.8 ligand superclasses per 20 proteins, broader than 52% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00141 | NAG | N-Acetylglucosamine | 100 |
| DB03740 | NDG | N-acetyl-alpha-D-glucosamine | 13 |
| DB02813 | GDL | 2-Acetamido-2-Deoxy-D-Glucono-1,5-Lactone | 12 |
| DB02676 | B3P | 2-[3-(2-Hydroxy-1,1-Dihydroxymethyl-Ethylamino)-Propylamino]-2-Hydroxymethyl-Propane-1,3-Diol | 6 |
| DB17678 | M1P | Alpha-D-mannose 1-phosphate | 6 |
| DB02379 | BGC | Beta-D-Glucose | 4 |
| DB03389 | XYS | alpha-D-Xylopyranose | 4 |
| DB03411 | EDG | 2-Hydroxymethyl-Pyrrolidine-3,4-Diol | 4 |
| DB12771 | 975 | Hydroxytyrosol | 4 |
| DB03142 | AHR | Alpha-L-Arabinose | 3 |
| DB02232 | CAQ | 1,2-Dihydroxybenzene | 2 |
| DB02561 | BDF | Beta-D-Fructopyranose | 2 |
| DB03486 | GP2 | Phosphomethylphosphonic acid guanosyl ester | 2 |
| DB04237 | TAM | Tris(Hydroxyethyl)Aminomethane | 2 |
| DB05018 | DGJ | Migalastat | 2 |
| DB12116 | KDH | Epigallocatechin gallate | 2 |
| DB00139 | SIN | Succinic acid | 1 |
| DB01261 | 715 | Sitagliptin | 1 |
| DB01862 | IPT | Isopropyl beta-D-thiogalactopyranoside | 1 |
| DB03570 | 144 | Tris-Hydroxymethyl-Methyl-Ammonium | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CAmetal | CALCIUM ION | 176 |
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | 103 |
| FRU | beta-D-fructofuranose | 51 |
| NAmetal | SODIUM ION | 47 |
| NDG | 2-acetamido-2-deoxy-alpha-D-glucopyranose | 38 |
| CL | CHLORIDE ION | 31 |
| MGmetal | MAGNESIUM ION | 31 |
| ZNmetal | ZINC ION | 28 |
| Kmetal | POTASSIUM ION | 25 |
| MAN | alpha-D-mannopyranose | 25 |
| BMA | beta-D-mannopyranose | 18 |
| EVB | sulfonato-calix[8]arene | 14 |
| GDL | 2-(acetylamido)-2-deoxy-D-glucono-1,5-lactone | 13 |
| FUB | beta-L-arabinofuranose | 10 |
| GLC | alpha-D-glucopyranose | 10 |
| B3P | 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | 8 |
| XLS | D-xylose | 8 |
| M1P | 1-O-phosphono-alpha-D-mannopyranose | 7 |
| XYP | beta-D-xylopyranose | 7 |
| GAL | beta-D-galactopyranose | 6 |