T-group (topology)
5.1.3 6-bladed
Ligands and drugs
6,687
Member domains
2,114
with ligand contacts (≤ 4 Å)
31.6% of members
1,808
with DrugDomain annotations
27.0% of members
1,407
with a DrugBank compound
21.0% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 5.1.3 belongs to X-group 5 beta-propeller-like, which binds 7.8 ligand superclasses per 20 proteins, broader than 52% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00141 | NAG | N-Acetylglucosamine | 594 |
| DB02600 | G39 | Oseltamivir acid | 105 |
| DB03991 | DAN | 2-deoxy-2,3-dehydro-N-acetylneuraminic acid | 75 |
| DB03879 | MFU | alpha-L-methyl-fucose | 56 |
| DB00558 | ZMR | Zanamivir | 54 |
| DB04473 | FUC | alpha-L-fucose | 45 |
| DB03721 | SIA | N-acetyl-alpha-neuraminic acid | 44 |
| DB02561 | BDF | Beta-D-Fructopyranose | 36 |
| DB06614 | BCZ | Peramivir | 27 |
| DB03283 | FUL | beta-L-fucose | 20 |
| DB03740 | NDG | N-acetyl-alpha-D-glucosamine | 13 |
| DB04211 | FSI | 5-(acetylamino)-3,5-dideoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acid | 13 |
| DB12791 | LNV | Laninamivir | 13 |
| DB03205 | PQQ | Pyrroloquinoline Quinone | 10 |
| DB02379 | BGC | Beta-D-Glucose | 9 |
| DB00145 | GLY | Glycine | 8 |
| DB04265 | SLB | N-acetyl-beta-neuraminic acid | 8 |
| DB04694 | FKD | 2,6-anhydro-3-deoxy-3-fluoronononic acid | 8 |
| DB01984 | DKT | (4S)-5-[[(1S)-1-Carboxy-2-cyclohexylethyl]amino]-4-[[(2S)-2-[[(3R)-4-cyclohexyl-2-oxo-3-(phenylmethoxycarbonylamino)butanoyl]amino]-5-(diaminomethylideneamino)pentanoyl]amino]-5-oxopentanoic acid | 6 |
| DB02210 | HEZ | Hexane-1,6-Diol | 6 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CAmetal | CALCIUM ION | 833 |
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | 631 |
| NAmetal | SODIUM ION | 180 |
| CL | CHLORIDE ION | 152 |
| G39 | (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid | 105 |
| DAN | 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID | 76 |
| BDF | beta-D-fructopyranose | 75 |
| MFU | methyl alpha-L-fucopyranoside | 66 |
| ZMR | ZANAMIVIR | 53 |
| ZNmetal | ZINC ION | 52 |
| QQ7 | cucurbit[7]uril | 49 |
| YT3metal | YTTRIUM (III) ION | 48 |
| MGmetal | MAGNESIUM ION | 45 |
| SIA | N-acetyl-alpha-neuraminic acid | 42 |
| FUC | alpha-L-fucopyranose | 41 |
| BCZ | 3-(1-ACETYLAMINO-2-ETHYL-BUTYL)-4-GUANIDINO-2-HYDROXY-CYCLOPENTANECARBOXYLIC ACID | 35 |
| BMA | beta-D-mannopyranose | 27 |
| EVB | sulfonato-calix[8]arene | 22 |
| FUL | beta-L-fucopyranose | 19 |
| MAN | alpha-D-mannopyranose | 19 |