F-group (family)
5001.1.1.2 7tm_1,Rhodopsin_N
Ligands and drugs
139
Member domains
35
with ligand contacts (≤ 4 Å)
25.2% of members
34
with DrugDomain annotations
24.5% of members
27
with a DrugBank compound
19.4% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 5001.1.1.2 belongs to X-group 5001 Family A G protein-coupled receptor-like, which binds 10.2 ligand superclasses per 20 proteins, broader than 95% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB03796 | PLM | Palmitic Acid | 23 |
| DB00141 | NAG | N-Acetylglucosamine | 13 |
| DB03017 | DAO | Lauric acid | 4 |
| DB01728 | PEF | 1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolamine | 2 |
| DB01159 | — | Halothane | 1 |
| DB01646 | — | N-Acetylmethionine | 1 |
| DB02451 | — | B-nonylglucoside | 1 |
| DB02482 | — | — | 1 |
| DB03152 | — | B-2-Octylglucoside | 1 |
| DB03381 | — | — | 1 |
| DB04079 | — | Heptane-1,2,3-Triol | 1 |
| DB04147 | — | Dodecyldimethylamine N-oxide | 1 |
| DB04233 | — | (Hydroxyethyloxy)Tri(Ethyloxy)Octane | 1 |
| DB04450 | — | Heptyl 1-Thiohexopyranoside | 1 |
| DB04522 | — | Dexfosfoserine | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| RET | RETINAL | 25 |
| PLM | PALMITIC ACID | 24 |
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | 15 |
| OLC | (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate | 10 |
| ACE | ACETYL GROUP | 9 |
| DAO | LAURIC ACID | 5 |
| DL2 | 5-chloranyl-2-(2-oxidanylidene-2-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-ethyl)-3~{H}-pyridin-6-one | 1 |
| DLB | 3-[1'-[(2~{S})-2-(4-chlorophenyl)-3-methyl-butanoyl]spiro[1,3-benzodioxole-2,4'-piperidine]-5-yl]propanoic acid | 1 |
| DLH | 2-(4-chlorophenyl)-1-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-ethanone | 1 |
| DN5 | (2~{S})-2-(3,4-dichlorophenyl)-3-methyl-1-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-butan-1-one | 1 |
| DNK | (2~{S})-3-methyl-2-phenyl-1-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-butan-1-one | 1 |
| DNZ | (2~{R},3~{S})-3-azanyl-2-(4-chlorophenyl)-1-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-butan-1-one | 1 |
| DO5 | (2~{R},3~{R})-2-(4-chlorophenyl)-3-oxidanyl-1-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-butan-1-one | 1 |
| DOK | (2~{S})-2-(4-chlorophenyl)-3-methyl-1-spiro[1,3-benzodioxole-2,4'-piperidine]-1'-yl-butan-1-one | 1 |
| PEF | DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE | 1 |