T-group (topology)
5026.1.1 PetN subunit of the cytochrome b6f complex
Ligands and drugs
152
Member domains
23
with ligand contacts (≤ 4 Å)
15.1% of members
21
with DrugDomain annotations
13.8% of members
20
with a DrugBank compound
13.2% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 5026.1.1 belongs to X-group 5026 PetN subunit of the cytochrome b6f complex, which has 5 proteins with classified ligands. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB06755 | BCR | Beta carotene | 17 |
| DB03317 | HEC | Ferroheme C | 10 |
| DB18267 | HEM | Ferroheme | 9 |
| DB02686 | UMQ | Undecyl-Beta-D-Maltopyranoside | 4 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| BCR | BETA-CAROTENE | 19 |
| OPC | (7R,17E)-4-HYDROXY-N,N,N,7-TETRAMETHYL-7-[(8E)-OCTADEC-8-ENOYLOXY]-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOS-17-EN-1-AMINIUM 4-OXIDE | 8 |
| HEM | PROTOPORPHYRIN IX CONTAINING FE | 7 |
| UMQ | UNDECYL-MALTOSIDE | 6 |
| 6PL | (4S,7R)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE | 4 |
| ECH | beta,beta-caroten-4-one | 4 |
| HEC | HEME C | 4 |
| 3WM | (1S,8E,1'R,8'Z)-1,1'-{[(2S)-3-hydroxypropane-1,2-diyl]bis(oxy)}bisoctadec-8-en-1-ol | 1 |
| 7PH | (1R)-2-(dodecanoyloxy)-1-[(phosphonooxy)methyl]ethyl tetradecanoate | 1 |
| LMG | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE | 1 |
| OZ2 | (2R)-3-{[(R)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-2-[(6Z)-tridec-6-enoyloxy]propyl (9Z)-octadec-9-enoate | 1 |
| TDS | 8-HYDROXY-5,7-DIMETHOXY-3-METHYL-2-TRIDECYL-4H-CHROMEN-4-ONE | 1 |