ECOD
F-group (family)

5030.1.1.1 PsbL

Open in classification tree →Pfam PF02419 →

Ligands and drugs

336
Member domains
325
with ligand contacts (≤ 4 Å)
96.7% of members
242
with DrugDomain annotations
72.0% of members
218
with a DrugBank compound
64.9% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 5030.1.1.1 belongs to X-group 5030 Photosystem II reaction center protein L, PsbL, which has 16 proteins with classified ligands. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB02043LHG1,2-Dipalmitoyl-Phosphatidyl-Glycerole208
DB02133CLAChlorophyll A63
DB03193STEStearic acid48
DB03426DGDDigalactosyl Diacyl Glycerol (Dgdg)14
DB04735MGEMonogalactosyldiacylglycerol10
DB06755BCRBeta carotene4
DB04450HTGHeptyl 1-Thiohexopyranoside1

Most frequently bound compounds

PDB ligandNameDomains in contact
CLACHLOROPHYLL A316
PL92,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE311
LMG1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE299
LHG1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE288
SQD1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL283
STESTEARIC ACID49
UNLUnknown ligand41
DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG)15
MGE(1S)-2-(ALPHA-L-ALLOPYRANOSYLOXY)-1-[(TRIDECANOYLOXY)METHYL]ETHYL PALMITATE10
CL7CHLOROPHYLL D8
PQ95-[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27-HEPTAMETHYLOCTACOSA-2,6,10,14,18,22,26-HEPTAENYL]-2,3-DIMETHYLBENZO-1,4-QUINONE8
BCRBETA-CAROTENE5
3PH1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE4
F6CChlorophyll F2
PLMPALMITIC ACID2
HTGheptyl 1-thio-beta-D-glucopyranoside1