ECOD
H-group (homology)

5033.1 Photosystem II reaction center protein M, PsbM

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Ligands and drugs

383
Member domains
335
with ligand contacts (≤ 4 Å)
87.5% of members
221
with DrugDomain annotations
57.7% of members
191
with a DrugBank compound
49.9% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 5033.1 belongs to X-group 5033 Photosystem II reaction center protein M, PsbM, which has 13 proteins with classified ligands. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB02043LHG1,2-Dipalmitoyl-Phosphatidyl-Glycerole181
DB03193STEStearic acid50
DB02133CLAChlorophyll A13
DB03426DGDDigalactosyl Diacyl Glycerol (Dgdg)13
DB04735MGEMonogalactosyldiacylglycerol8
DB06755BCRBeta carotene4
DB04464FMEN-Formylmethionine1

Most frequently bound compounds

PDB ligandNameDomains in contact
CLACHLOROPHYLL A327
LMG1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE317
BCRBETA-CAROTENE306
LHG1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE291
SQD1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL267
UNLUnknown ligand97
STESTEARIC ACID54
DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG)15
8CT(6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene11
MGE(1S)-2-(ALPHA-L-ALLOPYRANOSYLOXY)-1-[(TRIDECANOYLOXY)METHYL]ETHYL PALMITATE10
3PH1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE9
CL7CHLOROPHYLL D6
WVN1,3,3-trimethyl-2-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-3,7,12,16-tetramethyl-18-[(1R)-2,6,6-trimethylcyclohex-2-en-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohexene4
LFAEICOSANE3
PLMPALMITIC ACID3
LNLALPHA-LINOLENIC ACID2
FMEN-FORMYLMETHIONINE1