ECOD
F-group (family)

5036.1.1.1 Cytochrom_B559

Open in classification tree →Pfam PF00283 →

Ligands and drugs

334
Member domains
331
with ligand contacts (≤ 4 Å)
99.1% of members
248
with DrugDomain annotations
74.3% of members
248
with a DrugBank compound
74.3% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 5036.1.1.1 belongs to X-group 5036 Cytochrome b559 subunits, which binds 3.8 ligand superclasses per 20 proteins, narrower than 92% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB06755BCRBeta carotene235
DB18267HEMFerroheme230
DB02043LHG1,2-Dipalmitoyl-Phosphatidyl-Glycerole141
DB03426DGDDigalactosyl Diacyl Glycerol (Dgdg)61
DB03193STEStearic acid24
DB03317HECFerroheme C18
DB04735MGEMonogalactosyldiacylglycerol2

Most frequently bound compounds

PDB ligandNameDomains in contact
BCRBETA-CAROTENE315
HEMPROTOPORPHYRIN IX CONTAINING FE311
LMG1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE302
PL92,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE227
SQD1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL205
LHG1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE157
CLACHLOROPHYLL A73
CAmetalCALCIUM ION45
DGDDIGALACTOSYL DIACYL GLYCEROL (DGDG)17
HECHEME C16
STESTEARIC ACID15
UNLUnknown ligand14
MGE(1S)-2-(ALPHA-L-ALLOPYRANOSYLOXY)-1-[(TRIDECANOYLOXY)METHYL]ETHYL PALMITATE10
8CT(6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene9
MGmetalMAGNESIUM ION7
PLMPALMITIC ACID3
PQ95-[(2E,6E,10E,14E,18E,22E)-3,7,11,15,19,23,27-HEPTAMETHYLOCTACOSA-2,6,10,14,18,22,26-HEPTAENYL]-2,3-DIMETHYLBENZO-1,4-QUINONE3
AJPDigitonin2
NAmetalSODIUM ION2
VTQRRR-ALPHA-TOCOPHERYLQUINONE2