F-group (family)
5037.1.1.1 Photo_RC
Ligands and drugs
1,544
Member domains
1,159
with ligand contacts (≤ 4 Å)
75.1% of members
921
with DrugDomain annotations
59.7% of members
909
with a DrugBank compound
58.9% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 5037.1.1.1 belongs to X-group 5037 Bacterial photosystem II reaction centre L and M subunits-like, which binds 5.9 ligand superclasses per 20 proteins, narrower than 75% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02133 | CLA | Chlorophyll A | 482 |
| DB06755 | BCR | Beta carotene | 463 |
| DB02043 | LHG | 1,2-Dipalmitoyl-Phosphatidyl-Glycerole | 460 |
| DB03426 | DGD | Digalactosyl Diacyl Glycerol (Dgdg) | 445 |
| DB01853 | BCL | Bacteriochlorophyll A | 341 |
| DB09270 | U10 | Ubidecarenone | 297 |
| DB03429 | CDL | Tetrastearoyl cardiolipin | 163 |
| DB03193 | STE | Stearic acid | 100 |
| DB04450 | HTG | Heptyl 1-Thiohexopyranoside | 78 |
| DB04079 | HTO | Heptane-1,2,3-Triol | 72 |
| DB13075 | MQ7 | Menaquinone 7 | 56 |
| DB08690 | UQ2 | Ubiquinone Q2 | 29 |
| DB01728 | PEF | 1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolamine | 19 |
| DB04735 | MGE | Monogalactosyldiacylglycerol | 18 |
| DB08689 | UQ1 | Ubiquinone Q1 | 17 |
| DB03831 | MPG | [(Z)-octadec-9-enyl] (2R)-2,3-bis(oxidanyl)propanoate | 12 |
| DB18267 | HEM | Ferroheme | 6 |
| DB08215 | MST | Terbutryn | 5 |
| DB00132 | LNL | alpha-Linolenic acid | 3 |
| DB03279 | LMU | Dodecyl-Alpha-D-Maltoside | 2 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| FE2metal | FE (II) ION | 754 |
| PHO | PHEOPHYTIN A | 675 |
| CLA | CHLOROPHYLL A | 663 |
| LHG | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | 654 |
| DGD | DIGALACTOSYL DIACYL GLYCEROL (DGDG) | 640 |
| PL9 | 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE | 636 |
| BCR | BETA-CAROTENE | 629 |
| LMG | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE | 627 |
| SQD | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL | 584 |
| CL | CHLORIDE ION | 541 |
| BCL | BACTERIOCHLOROPHYLL A | 404 |
| FEmetal | FE (III) ION | 389 |
| BPH | BACTERIOPHEOPHYTIN A | 384 |
| U10 | UBIQUINONE-10 | 319 |
| OEX | CA-MN4-O5 CLUSTER | 273 |
| UNL | Unknown ligand | 248 |
| CDL | CARDIOLIPIN | 199 |
| HTG | heptyl 1-thio-beta-D-glucopyranoside | 172 |
| STE | STEARIC ACID | 104 |
| BPB | BACTERIOPHEOPHYTIN B | 90 |