ECOD
T-group (topology)

5040.1.1 Cytochrome c oxidase subunit II-like, transmembrane region

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Ligands and drugs

740
Member domains
357
with ligand contacts (≤ 4 Å)
48.2% of members
261
with DrugDomain annotations
35.3% of members
152
with a DrugBank compound
20.5% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 5040.1.1 belongs to X-group 5040 Cytochrome c oxidase subunit II-like, transmembrane region, which has 12 proteins with classified ligands. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB03429CDLTetrastearoyl cardiolipin123
DB02659CHDCholic Acid122
DB01728PEF1,2-dihexadecanoyl-sn-glycero-3-phosphoethanolamine11
DB09114PCFColfosceril palmitate2
DB03317HECFerroheme C1
DB03619DXCDeoxycholic acid1
DB04464—N-Formylmethionine1
DB05412—Talmapimod1

Most frequently bound compounds

PDB ligandNameDomains in contact
HEAHEME-A301
CDLCARDIOLIPIN156
CHDCHOLIC ACID144
PSC(7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE131
TGLTRISTEAROYLGLYCEROL124
PEK(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE107
DMUDECYL-BETA-D-MALTOPYRANOSIDE53
TRDTRIDECANE26
3PE1,2-Distearoyl-sn-glycerophosphoethanolamine23
LFAEICOSANE22
OLC(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate21
CDmetalCADMIUM ION18
HEOHEME O16
PEFDI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE12
PTYPHOSPHATIDYLETHANOLAMINE11
HASHEME-AS10
PGV(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE8
PC11,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE7
PLX(9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL6
XEXENON6