X-group (possible homology)

5055 Small-conductance potassium channel

Ligands and drugs

81
Member domains
16
with ligand contacts (≤ 4 Å)
19.8% of members
16
with DrugDomain annotations
19.8% of members
16
with a DrugBank compound
19.8% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

ClassyFire chemical superclasses of the ligands bound by this X-group's proteins, from DrugDomain annotations.

2
Proteins with classified ligands
3
Superclasses bound (of 23)
—
Superclasses per 20 proteins
fewer than 20 proteins: too few to compare at equal depth

The raw number of superclasses rises with the number of proteins sampled; the per-20 value compares X-groups at equal depth.

SuperclassProteinsExpected
0.25×observed / expected4×
RatioSignificance
Benzenoids20.114×not tested
Organoheterocyclic compounds20.36.59×not tested
Organic acids and derivatives20.36.55×not tested
enriched (q < 0.05)depleted (q < 0.05)not significantnot tested (expected < 5)

Unit: a protein (UniProt accession) with a ligand-binding domain in this X-group, counted once per superclass. Expected counts use each superclass's frequency across all ligand-binding X-groups; significance is Fisher's exact test with Benjamini–Hochberg correction. Buffers and crystallization additives are excluded. ECOD v295.2; the method follows the ECOD 2027 update, whose published figures used a slightly different artifact filter.

DrugBank compounds

DrugBankPDB ligandNameDomains
DB00740657Riluzole1

Most frequently bound compounds

PDB ligandNameDomains in contact
PHU1-phenylurea3
1KP(3E)-6,7-dichloro-3-(hydroxyimino)-1,3-dihydro-2H-indol-2-one2
0W81-ethyl-1,3-dihydro-2H-benzimidazol-2-one1
6576-(trifluoromethoxy)-1,3-benzothiazol-2-amine1
658N-(4-chlorophenyl)-2-(3,5-dimethyl-1H-pyrazol-1-yl)pyrimidin-4-amine1
AJV7-fluoro-3-(hydroxyamino)-2H-indol-2-one1
AJY(3Z)-6-bromo-3-(hydroxyimino)-5-methyl-1,3-dihydro-2H-indol-2-one1