F-group (family)
5069.1.1.3 Cyt_bd_oxida_I
Ligands and drugs
71
Member domains
28
with ligand contacts (≤ 4 Å)
39.4% of members
18
with DrugDomain annotations
25.4% of members
18
with a DrugBank compound
25.4% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 5069.1.1.3 belongs to X-group 5069 Transmembrane heme-binding four-helical bundle, which binds 7.6 ligand superclasses per 20 proteins, narrower than 50% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02182 | HEB | Hybrid Between B and C Type Hemes (Protoporphyrin Ixcontaining Fe) | 18 |
| DB09140 | OXY | Oxygen | 3 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| HDD | CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE | 21 |
| HEB | HEME B/C | 21 |
| HEM | PROTOPORPHYRIN IX CONTAINING FE | 7 |
| OXY | OXYGEN MOLECULE | 7 |
| MQ9 | MENAQUINONE-9 | 6 |
| A1JN4 | TRANS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE | 5 |
| LPP | 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE | 5 |
| POV | (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate | 4 |
| UQ8 | Ubiquinone-8 | 4 |
| 0NI | Aurachin D | 2 |
| MQ8 | MENAQUINONE 8 | 2 |
| PTY | PHOSPHATIDYLETHANOLAMINE | 2 |
| CDL | CARDIOLIPIN | 1 |
| PGT | (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE | 1 |