F-group (family)
5069.1.1.5 Cyt_bd_oxida_II
Ligands and drugs
58
Member domains
18
with ligand contacts (≤ 4 Å)
31.0% of members
15
with DrugDomain annotations
25.9% of members
4
with a DrugBank compound
6.9% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 5069.1.1.5 belongs to X-group 5069 Transmembrane heme-binding four-helical bundle, which binds 7.6 ligand superclasses per 20 proteins, narrower than 50% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02182 | HEB | Hybrid Between B and C Type Hemes (Protoporphyrin Ixcontaining Fe) | 2 |
| DB04327 | PEE | Phosphatidylethanolamine | 2 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| HDD | CIS-HEME D HYDROXYCHLORIN GAMMA-SPIROLACTONE | 10 |
| UQ8 | Ubiquinone-8 | 8 |
| CD4 | (2R,5R,11R,14R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-2,14-bis(tetradecanoyloxy)-4,6,10,12,16-pentaoxa-5,11-diphosphatriacont-1-yl tetradecanoate | 2 |
| CDL | CARDIOLIPIN | 2 |
| CDN | CARDIOLIPIN | 2 |
| DK8 | 2-[(2~{E},6~{E},10~{Z},14~{E},18~{E},22~{E},26~{E})-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaenyl]naphthalene-1,4-dione | 2 |
| HEB | HEME B/C | 2 |
| PEE | 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine | 2 |
| POV | (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate | 2 |
| MQ9 | MENAQUINONE-9 | 1 |