H-group (homology)
5075.1 Photosystem II antenna protein-like
Ligands and drugs
1,846
Member domains
1,334
with ligand contacts (≤ 4 Å)
72.3% of members
957
with DrugDomain annotations
51.8% of members
945
with a DrugBank compound
51.2% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 5075.1 belongs to X-group 5075 Photosystem II antenna protein-like, which binds 6.0 ligand superclasses per 20 proteins, narrower than 75% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02133 | CLA | Chlorophyll A | 856 |
| DB06755 | BCR | Beta carotene | 835 |
| DB02043 | LHG | 1,2-Dipalmitoyl-Phosphatidyl-Glycerole | 717 |
| DB03426 | DGD | Digalactosyl Diacyl Glycerol (Dgdg) | 525 |
| DB01022 | PQN | Phylloquinone | 327 |
| DB04450 | HTG | Heptyl 1-Thiohexopyranoside | 113 |
| DB03317 | HEC | Ferroheme C | 107 |
| DB03193 | STE | Stearic acid | 100 |
| DB03279 | LMU | Dodecyl-Alpha-D-Maltoside | 84 |
| DB18267 | HEM | Ferroheme | 73 |
| DB15914 | RRX | Cryptoxanthin | 50 |
| DB04506 | CHL | Chlorophyll B | 16 |
| DB00137 | LUT | (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL | 14 |
| DB04735 | MGE | Monogalactosyldiacylglycerol | 13 |
| DB01853 | BCL | Bacteriochlorophyll A | 10 |
| DB02379 | BGC | Beta-D-Glucose | 6 |
| DB12148 | 1L3 | Menatetrenone | 6 |
| DB00132 | LNL | alpha-Linolenic acid | 4 |
| DB00163 | VIV | Vitamin E | 2 |
| DB01707 | LAP | L-Alfa-Lysophosphatidylcholine, Lauroyl | 2 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CLA | CHLOROPHYLL A | 1,275 |
| BCR | BETA-CAROTENE | 1,201 |
| LHG | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | 1,074 |
| LMG | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE | 878 |
| DGD | DIGALACTOSYL DIACYL GLYCEROL (DGDG) | 744 |
| SQD | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL | 727 |
| OEX | CA-MN4-O5 CLUSTER | 264 |
| CL | CHLORIDE ION | 248 |
| PQN | PHYLLOQUINONE | 237 |
| UNL | Unknown ligand | 235 |
| HTG | heptyl 1-thio-beta-D-glucopyranoside | 170 |
| CAmetal | CALCIUM ION | 115 |
| LMU | DODECYL-ALPHA-D-MALTOSIDE | 108 |
| STE | STEARIC ACID | 107 |
| OEY | CA-MN4-O6 CLUSTER | 54 |
| CL7 | CHLOROPHYLL D | 44 |
| CHL | CHLOROPHYLL B | 41 |
| 8CT | (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene | 38 |
| HEM | PROTOPORPHYRIN IX CONTAINING FE | 35 |
| HEC | HEME C | 33 |