H-group (homology)
5084.1 OMPA-like
Ligands and drugs
882
Member domains
351
with ligand contacts (≤ 4 Å)
39.8% of members
278
with DrugDomain annotations
31.5% of members
229
with a DrugBank compound
26.0% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 5084.1 belongs to X-group 5084 Outer membrane meander beta-barrels, which binds 9.4 ligand superclasses per 20 proteins, broader than 87% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB03426 | DGD | Digalactosyl Diacyl Glycerol (Dgdg) | 89 |
| DB04450 | HTG | Heptyl 1-Thiohexopyranoside | 27 |
| DB03193 | STE | Stearic acid | 11 |
| DB02043 | LHG | 1,2-Dipalmitoyl-Phosphatidyl-Glycerole | 3 |
| DB02133 | CLA | Chlorophyll A | 2 |
| DB03967 | SDS | Dodecyl sulfate | 1 |
| DB03994 | ETA | Ethanolamine | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CAmetal | CALCIUM ION | 124 |
| DGD | DIGALACTOSYL DIACYL GLYCEROL (DGDG) | 103 |
| HTG | heptyl 1-thio-beta-D-glucopyranoside | 84 |
| LMG | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE | 42 |
| SQD | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL | 11 |
| UNL | Unknown ligand | 6 |
| NAmetal | SODIUM ION | 4 |
| CSmetal | CESIUM ION | 3 |
| CXE | PENTAETHYLENE GLYCOL MONODECYL ETHER | 3 |
| 3PH | 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE | 2 |
| AJP | Digitonin | 2 |
| CDmetal | CADMIUM ION | 2 |
| CL | CHLORIDE ION | 2 |
| OCT | N-OCTANE | 2 |
| ZNmetal | ZINC ION | 2 |
| ETA | ETHANOLAMINE | 1 |
| LFA | EICOSANE | 1 |
| LImetal | LITHIUM ION | 1 |
| MGmetal | MAGNESIUM ION | 1 |
| MRD | (4R)-2-METHYLPENTANE-2,4-DIOL | 1 |