T-group (topology)
5084.10.1 LPS-assembly protein LptD
Ligands and drugs
116
Member domains
19
with ligand contacts (≤ 4 Å)
16.4% of members
13
with DrugDomain annotations
11.2% of members
8
with a DrugBank compound
6.9% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 5084.10.1 belongs to X-group 5084 Outer membrane meander beta-barrels, which binds 9.4 ligand superclasses per 20 proteins, broader than 87% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
No DrugBank compounds are annotated on this group's domains.
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CL | CHLORIDE ION | 2 |
| PCJ | (2R)-3-{[(2S)-3-HYDROXY-2-(PALMITOYLAMINO)PROPYL]THIO}PROPANE-1,2-DIYL DIHEXADECANOATE | 2 |
| PXS | (2S)-propane-1,2-diyl dihexadecanoate | 2 |
| ZNmetal | ZINC ION | 2 |