T-group (topology)
5104.1.1 C-terminal domain in DHH phosphoesterases
Ligands and drugs
1,505
Member domains
86
with ligand contacts (≤ 4 Å)
5.7% of members
82
with DrugDomain annotations
5.4% of members
53
with a DrugBank compound
3.5% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 5104.1.1 belongs to X-group 5104 C-terminal domain in DHH phosphoesterases, which binds 4.0 ligand superclasses per 20 proteins, narrower than 89% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00131 | AMP | Adenosine phosphate | 15 |
| DB01972 | 5GP | Guanosine-5'-Monophosphate | 3 |
| DB00160 | — | Alanine | 2 |
| DB01812 | A3P | Adenosine 3',5'-diphosphate | 2 |
| DB02431 | CTP | Cytidine-5'-Triphosphate | 2 |
| DB00171 | ATP | ATP | 1 |
| DB01643 | TMP | Thymidine monophosphate | 1 |
| DB03403 | C5P | Cytidine-5'-Monophosphate | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| AMP | ADENOSINE MONOPHOSPHATE | 12 |
| 2PN | IMIDODIPHOSPHORIC ACID | 8 |
| MGmetal | MAGNESIUM ION | 8 |
| CL | CHLORIDE ION | 6 |
| MNmetal | MANGANESE (II) ION | 6 |
| CAmetal | CALCIUM ION | 4 |
| 5GP | GUANOSINE-5'-MONOPHOSPHATE | 3 |
| 2BA | (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide | 2 |
| A3P | ADENOSINE-3'-5'-DIPHOSPHATE | 2 |
| C2E | 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one) | 2 |
| CTP | CYTIDINE-5'-TRIPHOSPHATE | 2 |
| IOD | IODIDE ION | 2 |
| IY0 | [5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)furan-2-yl]methyl dihydrogen phosphate | 2 |
| IY9 | [5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3-oxidanyl-furan-2-yl]methyl dihydrogen phosphate | 2 |
| A1JDM | [(2~{R},3~{R},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-fluoranyl-2-(phosphonooxymethyl)oxolan-3-yl]oxy-[2-[(2~{R},3~{S},5~{R})-5-(6-aminopurin-9-yl)-3-oxidanyl-oxolan-2-yl]ethenyl]phosphinic acid | 1 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 1 |
| C5P | CYTIDINE-5'-MONOPHOSPHATE | 1 |
| IXK | [5-(6-aminopurin-9-yl)-2-(hydroxymethyl)furan-3-yl] [5-(6-aminopurin-9-yl)-3-oxidanyl-furan-2-yl]methyl hydrogen phosphate | 1 |
| TMP | THYMIDINE-5'-PHOSPHATE | 1 |
| ZNmetal | ZINC ION | 1 |